PSEA-Quant: A Protein Set Enrichment Analysis on Label-Free and Label-Based Protein Quantification Data

por Lavallée-Adam, Mathieu, Rauniyar, Navin, McClatchy, Daniel B., Yates, John R.
Publicado 2014

From Synapse to Function: A Perspective on the Role of Neuroproteomics in Elucidating Mechanisms of Drug Addiction

por Natividad, Luis A., Buczynski, Matthew W., McClatchy, Daniel B., Yates, John R.
Publicado 2018

Quantitative analysis of global protein stability rates in tissues

por McClatchy, Daniel B., Martínez-Bartolomé, Salvador, Gao, Yu, Lavallée-Adam, Mathieu, Yates, John R.
Publicado 2020

Role of the visual experience-dependent nascent proteome in neuronal plasticity

por Liu, Han-Hsuan, McClatchy, Daniel B, Schiapparelli, Lucio, Shen, Wanhua, Yates, John R, Cline, Hollis T
Publicado 2018

Differential Proteomic Analysis of Mammalian Tissues Using SILAM

por McClatchy, Daniel B., Liao, Lujian, Park, Sung Kyu, Xu, Tao, Lu, Bingwen, Yates III, John R.
Publicado 2011

Direct Detection of Biotinylated Proteins by Mass Spectrometry

por Schiapparelli, Lucio Matias, McClatchy, Daniel B., Liu, Han-Hsuan, Sharma, Pranav, Yates, John R., Cline, Hollis T.
Publicado 2014

Mocetinostat activates Krüppel-like factor 4 and protects against tissue destruction and inflammation in osteoarthritis

por Kawata, Manabu, McClatchy, Daniel B., Diedrich, Jolene K., Olmer, Merissa, Johnson, Kristen A., Yates, John R., Lotz, Martin K.
Publicado 2023

Exosomes regulate neurogenesis and circuit assembly

por Sharma, Pranav, Mesci, Pinar, Carromeu, Cassiano, McClatchy, Daniel R., Schiapparelli, Lucio, Yates, John R., Muotri, Alysson R., Cline, Hollis T.
Publicado 2019

Activity-Induced Cortical Glutamatergic Neuron Nascent Proteins

por Schiapparelli, Lucio M., Xie, Yi, Sharma, Pranav, McClatchy, Daniel B., Ma, Yuanhui, Yates, John R., Maximov, Anton, Cline, Hollis T.
Publicado 2022

Global quantitative analysis of phosphorylation underlying phencyclidine signaling and sensorimotor gating in the prefrontal cortex

por McClatchy, Daniel B., Savas, Jeffrey N., Martínez-Bartolomé, Salvador, Park, Sung Kyu, Maher, Pamela, Powell, Susan B., Yates, John R.
Publicado 2015

Pulsed Azidohomoalanine Labeling in Mammals (PALM) Detects Changes in Liver-Specific LKB1 Knockout Mice

por McClatchy, Daniel B., Ma, Yuanhui, Liu, Chao, Stein, Benjamin D., Martínez-Bartolomé, Salvador, Vasquez, Debbie, Hellberg, Kristina, Shaw, Reuben J., Yates, John R.
Publicado 2015

The Retinal Ganglion Cell Transportome Identifies Proteins Transported to Axons and Presynaptic Compartments in the Visual System In Vivo

por Schiapparelli, Lucio M., Shah, Sahil H., Ma, Yuanhui, McClatchy, Daniel B., Sharma, Pranav, Li, Jianli, Yates, John R., Goldberg, Jeffrey L., Cline, Hollis T.
Publicado 2019

Intracellular amyloid toxicity induces oxytosis/ferroptosis regulated cell death

por Huang, Ling, McClatchy, Daniel B., Maher, Pamela, Liang, Zhibin, Diedrich, Jolene K., Soriano-Castell, David, Goldberg, Joshua, Shokhirev, Maxim, Yates, John R., Schubert, David, Currais, Antonio
Publicado 2020

Interactome analysis illustrates diverse gene regulatory processes associated with LIN28A in human iPS cell-derived neural progenitor cells

por Yu, Nam-Kyung, McClatchy, Daniel B., Diedrich, Jolene K., Romero, Sarah, Choi, Jun-Hyeok, Martínez-Bartolomé, Salvador, Delahunty, Claire M., Muotri, Alysson R., Yates, John R.
Publicado 2021

Proteomic screen reveals diverse protein transport between connected neurons in the visual system

por Schiapparelli, Lucio M., Sharma, Pranav, He, Hai-Yan, Li, Jianli, Shah, Sahil H., McClatchy, Daniel B., Ma, Yuanhui, Liu, Han-Hsuan, Goldberg, Jeffrey L., Yates, John R., Cline, Hollis T.
Publicado 2022

Native top-down proteomics reveals EGFR–ERα signaling crosstalk in breast cancer cells dissociates NUTF2 dimers to modulate ERα signaling and cell growth

por Yates, John, Gomes, Fabio, Durbin, Kenneth, Schauer, Kevin, Nwachukwu, Jerome, Russo, Robin, Njeri, Jacqline, Saviola, Anthony, McClatchy, Daniel, Diedrich, Jolene, Garrett, Patrick, Papa, Alexandra, Ciolacu, Ianis, Kelleher, Neil, Nettles, Kendall
Publicado 2023

Altered network and rescue of human neurons derived from individuals with early-onset genetic epilepsy

por Negraes, Priscilla D., Trujillo, Cleber A., Yu, Nam-Kyung, Wu, Wei, Yao, Hang, Liang, Nicholas, Lautz, Jonathan D., Kwok, Ellius, McClatchy, Daniel, Diedrich, Jolene, de Bartolome, Salvador Martinez, Truong, Justin, Szeto, Ryan, Tran, Timothy, Herai, Roberto H., Smith, Stephen E. P., Haddad, Gabriel G., Yates, John R., Muotri, Alysson R.
Publicado 2021