Abnormal Dosage of Ultraconserved Elements Is Highly Disfavored in Healthy Cells but Not Cancer Cells

por McCole, Ruth B., Fonseka, Chamith Y., Koren, Amnon, Wu, C.-ting
Publicado 2014

Short Interspersed Element (SINE) Depletion and Long Interspersed Element (LINE) Abundance Are Not Features Universally Required for Imprinting

por Cowley, Michael, de Burca, Anna, McCole, Ruth B., Chahal, Mandeep, Saadat, Ghazal, Oakey, Rebecca J., Schulz, Reiner
Publicado 2011

Genome-wide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differe...

por Prickett, Adam R., Barkas, Nikolaos, McCole, Ruth B., Hughes, Siobhan, Amante, Samuele M., Schulz, Reiner, Oakey, Rebecca J.
Publicado 2013

Transcript- and tissue-specific imprinting of a tumour suppressor gene

por Schulz, Reiner, McCole, Ruth B., Woodfine, Kathryn, Wood, Andrew J., Chahal, Mandeep, Monk, David, Moore, Gudrun E., Oakey, Rebecca J.
Publicado 2009

A Case-by-Case Evolutionary Analysis of Four Imprinted Retrogenes

por McCole, Ruth B, Loughran, Noeleen B, Chahal, Mandeep, Fernandes, Luis P, Roberts, Roland G, Fraternali, Franca, O'Connell, Mary J, Oakey, Rebecca J
Publicado 2011

Genes with monoallelic expression contribute disproportionately to genetic diversity in humans

por Savova, Virginia, Chun, Sung, Sohail, Mashaal, McCole, Ruth B., Witwicki, Robert, Gai, Lisa, Lenz, Tobias L., Wu, C.-ting, Sunyaev, Shamil R., Gimelbrant, Alexander A.
Publicado 2016

Highly structured homolog pairing reflects functional organization of the Drosophila genome

por AlHaj Abed, Jumana, Erceg, Jelena, Goloborodko, Anton, Nguyen, Son C., McCole, Ruth B., Saylor, Wren, Fudenberg, Geoffrey, Lajoie, Bryan R., Dekker, Job, Mirny, Leonid A., Wu, C.-ting
Publicado 2019

Oligopaints: highly efficient, bioinformatically designed probes for fluorescence in situ hybridization

por Beliveau, Brian J, Joyce, Eric F, Apostolopoulosa, Nicholas, Yilmaza, Feyza, Fonseka, Chamith Y, McCole, Ruth B, Chang, Yiming, Li, Jin Billy, Senaratne, Tharanga Niroshini, Williams, Benjamin R, Rouillard, Jean-Marie, Wu, Chao-ting
Publicado 2013

The genome-wide multi-layered architecture of chromosome pairing in early Drosophila embryos

por Erceg, Jelena, AlHaj Abed, Jumana, Goloborodko, Anton, Lajoie, Bryan R., Fudenberg, Geoffrey, Abdennur, Nezar, Imakaev, Maxim, McCole, Ruth B., Nguyen, Son C., Saylor, Wren, Joyce, Eric F., Senaratne, T. Niroshini, Hannan, Mohammed A., Nir, Guy, Dekker, Job, Mirny, Leonid A., Wu, C.-ting
Publicado 2019

Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes

por Beliveau, Brian J., Boettiger, Alistair N., Avendaño, Maier S., Jungmann, Ralf, McCole, Ruth B., Joyce, Eric F., Kim-Kiselak, Caroline, Bantignies, Frédéric, Fonseka, Chamith Y., Erceg, Jelena, Hannan, Mohammed A., Hoang, Hien G., Colognori, David, Lee, Jeannie T., Shih, William M., Yin, Peng, Zhuang, Xiaowei, Wu, Chao-ting
Publicado 2015

Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

por Nir, Guy, Farabella, Irene, Pérez Estrada, Cynthia, Ebeling, Carl G., Beliveau, Brian J., Sasaki, Hiroshi M., Lee, S. Dean, Nguyen, Son C., McCole, Ruth B., Chattoraj, Shyamtanu, Erceg, Jelena, AlHaj Abed, Jumana, Martins, Nuno M. C., Nguyen, Huy Q., Hannan, Mohammed A., Russell, Sheikh, Durand, Neva C., Rao, Suhas S. P., Kishi, Jocelyn Y., Soler-Vila, Paula, Di Pierro, Michele, Onuchic, José N., Callahan, Steven P., Schreiner, John M., Stuckey, Jeff A., Yin, Peng, Aiden, Erez Lieberman, Marti-Renom, Marc A., Wu, C.-ting
Publicado 2018