RNAseqCNV: analysis of large-scale copy number variations from RNA-seq data

por Bařinka, Jan, Hu, Zunsong, Wang, Lu, Wheeler, David A., Rahbarinia, Delaram, McLeod, Clay, Gu, Zhaohui, Mullighan, Charles G.
Publicado 2022

NetBID2 provides comprehensive hidden driver analysis

por Dong, Xinran, Ding, Liang, Thrasher, Andrew, Wang, Xinge, Liu, Jingjing, Pan, Qingfei, Rash, Jordan, Dhungana, Yogesh, Yang, Xu, Risch, Isabel, Li, Yuxin, Yan, Lei, Rusch, Michael, McLeod, Clay, Yan, Koon-Kiu, Peng, Junmin, Chi, Hongbo, Zhang, Jinghui, Yu, Jiyang
Publicado 2023

Structure and evolution of double minutes in diagnosis and relapse brain tumors

por Xu, Ke, Ding, Liang, Chang, Ti-Cheng, Shao, Ying, Chiang, Jason, Mulder, Heather, Wang, Shuoguo, Shaw, Tim I., Wen, Ji, Hover, Laura, McLeod, Clay, Wang, Yong-Dong, Easton, John, Rusch, Michael, Dalton, James, Downing, James R., Ellison, David W., Zhang, Jinghui, Baker, Suzanne J., Wu, Gang
Publicado 2018

CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data

por Tian, Liqing, Li, Yongjin, Edmonson, Michael N., Zhou, Xin, Newman, Scott, McLeod, Clay, Thrasher, Andrew, Liu, Yu, Tang, Bo, Rusch, Michael C., Easton, John, Ma, Jing, Davis, Eric, Trull, Austyn, Michael, J. Robert, Szlachta, Karol, Mullighan, Charles, Baker, Suzanne J., Downing, James R., Ellison, David W., Zhang, Jinghui
Publicado 2020

Pediatric Cancer Variant Pathogenicity Information Exchange (PeCanPIE): a cloud-based platform for curating and classifying germline variants

por Edmonson, Michael N., Patel, Aman N., Hedges, Dale J., Wang, Zhaoming, Rampersaud, Evadnie, Kesserwan, Chimene A., Zhou, Xin, Liu, Yanling, Newman, Scott, Rusch, Michael C., McLeod, Clay L., Wilkinson, Mark R., Rice, Stephen V., Soussi, Thierry, Taylor, J. Paul, Benatar, Michael, Becksfort, Jared B., Nichols, Kim E., Robison, Leslie L., Downing, James R., Zhang, Jinghui
Publicado 2019