Gene Co-Expression Network Analysis for Identifying Modules and Functionally Enriched Pathways in Type 1 Diabetes

por Riquelme Medina, Ignacio, Lubovac-Pilav, Zelmina
Publicado 2016

A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications

por Alemán, Alejandro, Garcia-Garcia, Francisco, Medina, Ignacio, Dopazo, Joaquín
Publicado 2014

HPG pore: an efficient and scalable framework for nanopore sequencing data

por Tarraga, Joaquin, Gallego, Asunción, Arnau, Vicente, Medina, Ignacio, Dopazo, Joaquin
Publicado 2016

Serial Expression Analysis: a web tool for the analysis of serial gene expression data

por Nueda, Maria José, Carbonell, José, Medina, Ignacio, Dopazo, Joaquín, Conesa, Ana
Publicado 2010

A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies

por Alemán, Alejandro, Garcia-Garcia, Francisco, Salavert, Francisco, Medina, Ignacio, Dopazo, Joaquín
Publicado 2014

Fast inexact mapping using advanced tree exploration on backward search methods

por Salavert, José, Tomás, Andrés, Tárraga, Joaquín, Medina, Ignacio, Dopazo, Joaquín, Blanquer, Ignacio
Publicado 2015

Inferring the regulatory network behind a gene expression experiment

por Bleda, Marta, Medina, Ignacio, Alonso, Roberto, De Maria, Alejandro, Salavert, Francisco, Dopazo, Joaquin
Publicado 2012

Inferring the functional effect of gene expression changes in signaling pathways

por Sebastián-León, Patricia, Carbonell, José, Salavert, Francisco, Sanchez, Rubén, Medina, Ignacio, Dopazo, Joaquín
Publicado 2013

A parallel and sensitive software tool for methylation analysis on multicore platforms

por Tárraga, Joaquín, Pérez, Mariano, Orduña, Juan M., Duato, José, Medina, Ignacio, Dopazo, Joaquín
Publicado 2015

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments

por Al-Shahrour, Fátima, Minguez, Pablo, Tárraga, Joaquín, Medina, Ignacio, Alloza, Eva, Montaner, David, Dopazo, Joaquín
Publicado 2007

Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics

por Tárraga, Joaquín, Medina, Ignacio, Arbiza, Leonardo, Huerta-Cepas, Jaime, Gabaldón, Toni, Dopazo, Joaquín, Dopazo, Hernán
Publicado 2007

Assessing the impact of mutations found in next generation sequencing data over human signaling pathways

por Hernansaiz-Ballesteros, Rosa D., Salavert, Francisco, Sebastián-León, Patricia, Alemán, Alejandro, Medina, Ignacio, Dopazo, Joaquín
Publicado 2015

Web-based network analysis and visualization using CellMaps

por Salavert, Francisco, García-Alonso, Luz, Sánchez, Rubén, Alonso, Roberto, Bleda, Marta, Medina, Ignacio, Dopazo, Joaquín
Publicado 2016

PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources

por Perez-Gil, Daniel, Lopez, Francisco J., Dopazo, Joaquin, Marin-Garcia, Pablo, Rendon, Augusto, Medina, Ignacio
Publicado 2019

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling

por Conde, Lucía, Montaner, David, Burguet-Castell, Jordi, Tárraga, Joaquín, Medina, Ignacio, Al-Shahrour, Fátima, Dopazo, Joaquín
Publicado 2007

VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing

por Medina, Ignacio, De Maria, Alejandro, Bleda, Marta, Salavert, Francisco, Alonso, Roberto, Gonzalez, Cristina Y., Dopazo, Joaquin
Publicado 2012

Biological processes, properties and molecular wiring diagrams of candidate low-penetrance breast cancer susceptibility genes

por Bonifaci, Núria, Berenguer, Antoni, Díez, Javier, Reina, Oscar, Medina, Ignacio, Dopazo, Joaquín, Moreno, Víctor, Pujana, Miguel Angel
Publicado 2008

Genome Maps, a new generation genome browser

por Medina, Ignacio, Salavert, Francisco, Sanchez, Rubén, de Maria, Alejandro, Alonso, Roberto, Escobar, Pablo, Bleda, Marta, Dopazo, Joaquín
Publicado 2013

Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases

por Reumers, Joke, Conde, Lucia, Medina, Ignacio, Maurer-Stroh, Sebastian, Van Durme, Joost, Dopazo, Joaquin, Rousseau, Frederic, Schymkowitz, Joost
Publicado 2008