DNA-protein interactions in high definition

por Mendenhall, Eric M, Bernstein, Bradley E
Publicado 2012

Identification of promoter targets of enhancers by epigenetic knockdown using TAL DNA binding proteins

por Mendenhall, Eric M, Williamson, Kaylyn, Reyon, Deepak, Joung, J Keith, Bernstein, Bradley E
Publicado 2013

Locus-specific editing of histone modifications at endogenous enhancers using programmable TALE-LSD1 fusions

por Mendenhall, Eric M., Williamson, Kaylyn E., Reyon, Deepak, Zou, James Y., Ram, Oren, Joung, J. Keith, Bernstein, Bradley E.
Publicado 2013

GC-Rich Sequence Elements Recruit PRC2 in Mammalian ES Cells

por Mendenhall, Eric M., Koche, Richard P., Truong, Thanh, Zhou, Vicky W., Issac, Biju, Chi, Andrew S., Ku, Manching, Bernstein, Bradley E.
Publicado 2010

Functional Analysis of Human Hematopoietic Stem Cell Gene Expression Using Zebrafish

por Eckfeldt, Craig E, Mendenhall, Eric M, Flynn, Catherine M, Wang, Tzu-Fei, Pickart, Michael A, Grindle, Suzanne M, Ekker, Stephen C, Verfaillie, Catherine M
Publicado 2005

CETCh-seq: CRISPR epitope tagging ChIP-seq of DNA-binding proteins

por Savic, Daniel, Partridge, E. Christopher, Newberry, Kimberly M., Smith, Sophia B., Meadows, Sarah K., Roberts, Brian S., Mackiewicz, Mark, Mendenhall, Eric M., Myers, Richard M.
Publicado 2015

Coordinate regulation of ELF5 and EHF at the chr11p13 CF modifier region

por Swahn, Hannah, Sabith Ebron, Jey, Lamar, Kay‐Marie, Yin, Shiyi, Kerschner, Jenny L., NandyMazumdar, Monali, Coppola, Candice, Mendenhall, Eric M., Leir, Shih‐Hsing, Harris, Ann
Publicado 2019

Examination of cord blood at birth in women with SARS-CoV-2 exposure and/or vaccination during pregnancy and relationship to fetal complete blood count, cortisol, ferritin, vitamin...

por Mendenhall, Eric, Hogan, Mary Beth, Nudelman, Matthew, Preston, Deborah L., Weese, Hayley, Muckleroy, Garrett, Needens, Jordan, Addicott, Katherine, Haas, Jessica Dailey, Roybal, Ashlee, Miller, Dustin, Cottrell, Jesse, Massey, Cynthia, Govindaswami, Balaji
Publicado 2023

Genomewide Analysis of PRC1 and PRC2 Occupancy Identifies Two Classes of Bivalent Domains

por Ku, Manching, Koche, Richard P., Rheinbay, Esther, Mendenhall, Eric M., Endoh, Mitsuhiro, Mikkelsen, Tarjei S., Presser, Aviva, Nusbaum, Chad, Xie, Xiaohui, Chi, Andrew S., Adli, Mazhar, Kasif, Simon, Ptaszek, Leon M., Cowan, Chad A., Lander, Eric S., Koseki, Haruhiko, Bernstein, Bradley E.
Publicado 2008

Allele biased transcription factor binding across human brain regions gives mechanistic insight into eQTLs

por Moyers, Belle A., Loupe, Jacob M., Felker, Stephanie A., Lawlor, James M.J., Anderson, Ashlyn G., Rodriguez-Nunez, Ivan, Bunney, William E., Bunney, Blynn G., Cartagena, Preston M., Sequeira, Adolfo, Watson, Stanley J., Akil, Huda, Mendenhall, Eric M., Cooper, Gregory M., Myers, Richard M.
Publicado 2023

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis

por Attanasio, Catia, Nord, Alex S., Zhu, Yiwen, Blow, Matthew J., Biddie, Simon C., Mendenhall, Eric M., Dixon, Jesse, Wright, Crystal, Hosseini, Roya, Akiyama, Jennifer A., Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Afzal, Veena, Ren, Bing, Bernstein, Bradley E., Rubin, Edward M., Visel, Axel, Pennacchio, Len A.
Publicado 2014

Genome-Wide Reverse Genetics Framework to Identify Novel Functions of the Vertebrate Secretome

por Pickart, Michael A., Klee, Eric W., Nielsen, Aubrey L., Sivasubbu, Sridhar, Mendenhall, Eric M., Bill, Brent R., Chen, Eleanor, Eckfeldt, Craig E., Knowlton, Michelle, Robu, Mara E., Larson, Jon D., Deng, Yun, Schimmenti, Lisa A., Ellis, Lynda B.M., Verfaillie, Catherine M., Hammerschmidt, Matthias, Farber, Steven A., Ekker, Stephen C.
Publicado 2006

Occupancy maps of 208 chromatin-associated proteins in one human cell type

por Partridge, E. Christopher, Chhetri, Surya B., Prokop, Jeremy W., Ramaker, Ryne C., Jansen, Camden S., Goh, Say-Tar, Mackiewicz, Mark, Newberry, Kimberly M., Brandsmeier, Laurel A., Meadows, Sarah K., Messer, C. Luke, Hardigan, Andrew A., Coppola, Candice J., Dean, Emma C., Jiang, Shan, Savic, Daniel, Mortazavi, Ali, Wold, Barbara J., Myers, Richard M., Mendenhall, Eric M.
Publicado 2020

Perspectives on ENCODE

por Snyder, Michael P., Gingeras, Thomas R., Moore, Jill E., Weng, Zhiping, Gerstein, Mark B., Ren, Bing, Hardison, Ross C., Stamatoyannopoulos, John A., Graveley, Brenton R., Feingold, Elise A., Pazin, Michael J., Pagan, Michael, Gilchrist, Daniel A., Hitz, Benjamin C., Cherry, J. Michael, Bernstein, Bradley E., Mendenhall, Eric M., Zerbino, Daniel R., Frankish, Adam, Flicek, Paul, Myers, Richard M.
Publicado 2020

Author Correction: Perspectives on ENCODE

por Snyder, Michael P., Gingeras, Thomas R., Moore, Jill E., Weng, Zhiping, Gerstein, Mark B., Ren, Bing, Hardison, Ross C., Stamatoyannopoulos, John A., Graveley, Brenton R., Feingold, Elise A., Pazin, Michael J., Pagan, Michael, Gilchrist, Daniel A., Hitz, Benjamin C., Cherry, J. Michael, Bernstein, Bradley E., Mendenhall, Eric M., Zerbino, Daniel R., Frankish, Adam, Flicek, Paul, Myers, Richard M.
Publicado 2022

A small molecule that induces translational readthrough of CFTR nonsense mutations by eRF1 depletion

por Sharma, Jyoti, Du, Ming, Wong, Eric, Mutyam, Venkateshwar, Li, Yao, Chen, Jianguo, Wangen, Jamie, Thrasher, Kari, Fu, Lianwu, Peng, Ning, Tang, Liping, Liu, Kaimao, Mathew, Bini, Bostwick, Robert J., Augelli-Szafran, Corinne E., Bihler, Hermann, Liang, Feng, Mahiou, Jerome, Saltz, Josef, Rab, Andras, Hong, Jeong, Sorscher, Eric J., Mendenhall, Eric M., Coppola, Candice J., Keeling, Kim M., Green, Rachel, Mense, Martin, Suto, Mark J., Rowe, Steven M., Bedwell, David M.
Publicado 2021

Expanded encyclopaedias of DNA elements in the human and mouse genomes

por Moore, Jill E., Purcaro, Michael J., Pratt, Henry E., Epstein, Charles B., Shoresh, Noam, Adrian, Jessika, Kawli, Trupti, Davis, Carrie A., Dobin, Alexander, Kaul, Rajinder, Halow, Jessica, Van Nostrand, Eric L., Freese, Peter, Gorkin, David U., Shen, Yin, He, Yupeng, Mackiewicz, Mark, Pauli-Behn, Florencia, Williams, Brian A., Mortazavi, Ali, Keller, Cheryl A., Zhang, Xiao-Ou, Elhajjajy, Shaimae I., Huey, Jack, Dickel, Diane E., Snetkova, Valentina, Wei, Xintao, Wang, Xiaofeng, Rivera-Mulia, Juan Carlos, Rozowsky, Joel, Zhang, Jing, Chhetri, Surya B., Zhang, Jialing, Victorsen, Alec, White, Kevin P., Visel, Axel, Yeo, Gene W., Burge, Christopher B., Lécuyer, Eric, Gilbert, David M., Dekker, Job, Rinn, John, Mendenhall, Eric M., Ecker, Joseph R., Kellis, Manolis, Klein, Robert J., Noble, William S., Kundaje, Anshul, Guigó, Roderic, Farnham, Peggy J., Cherry, J. Michael, Myers, Richard M., Ren, Bing, Graveley, Brenton R., Gerstein, Mark B., Pennacchio, Len A., Snyder, Michael P., Bernstein, Bradley E., Wold, Barbara, Hardison, Ross C., Gingeras, Thomas R., Stamatoyannopoulos, John A., Weng, Zhiping
Publicado 2020

Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes

por Moore, Jill E., Purcaro, Michael J., Pratt, Henry E., Epstein, Charles B., Shoresh, Noam, Adrian, Jessika, Kawli, Trupti, Davis, Carrie A., Dobin, Alexander, Kaul, Rajinder, Halow, Jessica, Van Nostrand, Eric L., Freese, Peter, Gorkin, David U., Shen, Yin, He, Yupeng, Mackiewicz, Mark, Pauli-Behn, Florencia, Williams, Brian A., Mortazavi, Ali, Keller, Cheryl A., Zhang, Xiao-Ou, Elhajjajy, Shaimae I., Huey, Jack, Dickel, Diane E., Snetkova, Valentina, Wei, Xintao, Wang, Xiaofeng, Rivera-Mulia, Juan Carlos, Rozowsky, Joel, Zhang, Jing, Chhetri, Surya B., Zhang, Jialing, Victorsen, Alec, White, Kevin P., Visel, Axel, Yeo, Gene W., Burge, Christopher B., Lécuyer, Eric, Gilbert, David M., Dekker, Job, Rinn, John, Mendenhall, Eric M., Ecker, Joseph R., Kellis, Manolis, Klein, Robert J., Noble, William S., Kundaje, Anshul, Guigó, Roderic, Farnham, Peggy J., Cherry, J. Michael, Myers, Richard M., Ren, Bing, Graveley, Brenton R., Gerstein, Mark B., Pennacchio, Len A., Snyder, Michael P., Bernstein, Bradley E., Wold, Barbara, Hardison, Ross C., Gingeras, Thomas R., Stamatoyannopoulos, John A., Weng, Zhiping
Publicado 2022