USING NEURAL NETWORK TO UNCOVER CELL TYPES THROUGH SNRNA SEQUENCING

por Paryani, Fahad, Menon, Vilas
Publicado 2019

Assessment of Spontaneous Neuronal Activity In Vitro Using Multi-Well Multi-Electrode Arrays: Implications for Assay Development

por Negri, Joseph, Menon, Vilas, Young-Pearse, Tracy L.
Publicado 2020

Discovering sparse transcription factor codes for cell states and state transitions during development

por Furchtgott, Leon A, Melton, Samuel, Menon, Vilas, Ramanathan, Sharad
Publicado 2017

Selecting single cell clustering parameter values using subsampling-based robustness metrics

por Patterson-Cross, Ryan B., Levine, Ariel J., Menon, Vilas
Publicado 2021

The Influence of Synaptic Weight Distribution on Neuronal Population Dynamics

por Iyer, Ramakrishnan, Menon, Vilas, Buice, Michael, Koch, Christof, Mihalas, Stefan
Publicado 2013

Molecular Logic of Spinocerebellar Tract Neuron Diversity and Connectivity

por Baek, Myungin, Menon, Vilas, Jessell, Thomas M., Hantman, Adam W., Dasen, Jeremy S.
Publicado 2019

Single Cell/Nucleus Transcriptomics Comparison in Zebrafish and Humans Reveals Common and Distinct Molecular Responses to Alzheimer’s Disease

por Cosacak, Mehmet Ilyas, Bhattarai, Prabesh, De Jager, Philip L., Menon, Vilas, Tosto, Giuseppe, Kizil, Caghan
Publicado 2022

St18 specifies globus pallidus projection neuron identity in MGE lineage

por Nunnelly, Luke F., Campbell, Melissa, Lee, Dylan I., Dummer, Patrick, Gu, Guoqiang, Menon, Vilas, Au, Edmund
Publicado 2022

Molecular correlates of muscle spindle and Golgi tendon organ afferents

por Oliver, Katherine M., Florez-Paz, Danny M., Badea, Tudor Constantin, Mentis, George Z., Menon, Vilas, de Nooij, Joriene C.
Publicado 2021

Cell type-specific changes identified by single-cell transcriptomics in Alzheimer’s disease

por Luquez, Tain, Gaur, Pallavi, Kosater, Ivy M, Lam, Matti, Lee, Dylan I, Mares, Jason, Paryani, Fahad, Yadav, Archana, Menon, Vilas
Publicado 2022

Single-nucleus RNA-seq identifies Huntington disease astrocyte states

por Al-Dalahmah, Osama, Sosunov, Alexander A., Shaik, A., Ofori, Kenneth, Liu, Yang, Vonsattel, Jean Paul, Adorjan, Istvan, Menon, Vilas, Goldman, James E.
Publicado 2020

Generalized leaky integrate-and-fire models classify multiple neuron types

por Teeter, Corinne, Iyer, Ramakrishnan, Menon, Vilas, Gouwens, Nathan, Feng, David, Berg, Jim, Szafer, Aaron, Cain, Nicholas, Zeng, Hongkui, Hawrylycz, Michael, Koch, Christof, Mihalas, Stefan
Publicado 2018

Bulk and Single-Nucleus Transcriptomics Highlight Intra-Telencephalic and Somatostatin Neurons in Alzheimer’s Disease

por Consens, Micaela E., Chen, Yuxiao, Menon, Vilas, Wang, Yanling, Schneider, Julie A., De Jager, Philip L., Bennett, David A., Tripathy, Shreejoy J., Felsky, Daniel
Publicado 2022

TREM2 gene expression associations with Alzheimer’s disease neuropathology are region-specific: implications for cortical versus subcortical microglia

por Winfree, Rebecca L., Seto, Mabel, Dumitrescu, Logan, Menon, Vilas, De Jager, Philip, Wang, Yanling, Schneider, Julie, Bennett, David A., Jefferson, Angela L., Hohman, Timothy J.
Publicado 2023

Improving reliability and absolute quantification of human brain microarray data by filtering and scaling probes using RNA-Seq

por Miller, Jeremy A, Menon, Vilas, Goldy, Jeff, Kaykas, Ajamete, Lee, Chang-Kyu, Smith, Kimberly A, Shen, Elaine H, Phillips, John W, Lein, Ed S, Hawrylycz, Mike J
Publicado 2014

scOrange—a tool for hands-on training of concepts from single-cell data analytics

por Stražar, Martin, Žagar, Lan, Kokošar, Jaka, Tanko, Vesna, Erjavec, Aleš, Poličar, Pavlin G, Starič, Anže, Demšar, Janez, Shaulsky, Gad, Menon, Vilas, Lemire, Andrew, Parikh, Anup, Zupan, Blaž
Publicado 2019

A single-nucleus transcriptome-wide association study implicates novel genes in depression pathogenesis

por Zeng, Lu, Fujita, Masashi, Gao, Zongmei, White, Charles C., Green, Gilad S., Habib, Naomi, Menon, Vilas, Bennett, David A., Boyle, Patricia A., Klein, Hans-Ulrich, De Jager, Philip L.
Publicado 2023

Genome engineering of isogenic human ES cells to model autism disorders

por Martinez, Refugio A., Stein, Jason L., Krostag, Anne-Rachel F., Nelson, Angelique M., Marken, John S., Menon, Vilas, May, Ryan C., Yao, Zizhen, Kaykas, Ajamete, Geschwind, Daniel H., Grimley, Joshua S.
Publicado 2015

Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states

por Jang, Sumin, Choubey, Sandeep, Furchtgott, Leon, Zou, Ling-Nan, Doyle, Adele, Menon, Vilas, Loew, Ethan B, Krostag, Anne-Rachel, Martinez, Refugio A, Madisen, Linda, Levi, Boaz P, Ramanathan, Sharad
Publicado 2017

A harmonized atlas of mouse spinal cord cell types and their spatial organization

por Russ, Daniel E., Cross, Ryan B. Patterson, Li, Li, Koch, Stephanie C., Matson, Kaya J. E., Yadav, Archana, Alkaslasi, Mor R., Lee, Dylan I., Le Pichon, Claire E., Menon, Vilas, Levine, Ariel J.
Publicado 2021