Multiclass relevance units machine: benchmark evaluation and application to small ncRNA discovery

por Menor, Mark, Baek , Kyungim, Poisson, Guylaine
Publicado 2013

Prediction of Mature MicroRNA and Piwi-Interacting RNA without a Genome Reference or Precursors

por Menor, Mark S., Baek, Kyungim, Poisson, Guylaine
Publicado 2015

mirMark: a site-level and UTR-level classifier for miRNA target prediction

por Menor, Mark, Ching, Travers, Zhu, Xun, Garmire, David, Garmire, Lana X
Publicado 2014

Development of somatic mutation signatures for risk stratification and prognosis in lung and colorectal adenocarcinomas

por Menor, Mark, Zhu, Yong, Wang, Yu, Zhang, Jicai, Jiang, Bin, Deng, Youping
Publicado 2019

The landscape of bacterial presence in tumor and adjacent normal tissue across 9 major cancer types using TCGA exome sequencing

por Rodriguez, Rebecca M., Hernandez, Brenda Y., Menor, Mark, Deng, Youping, Khadka, Vedbar S.
Publicado 2020

Tissue-associated microbial detection in cancer using human sequencing data

por Rodriguez, Rebecca M., Khadka, Vedbar S., Menor, Mark, Hernandez, Brenda Y., Deng, Youping
Publicado 2020

Bacterial Diversity Correlates with Overall Survival in Cancers of the Head and Neck, Liver, and Stomach

por Rodriguez, Rebecca M., Menor, Mark, Hernandez, Brenda Y., Deng, Youping, Khadka, Vedbar S.
Publicado 2021

The miRNA Profile of Inflammatory Colorectal Tumors Identify TGF-β as a Companion Target for Checkpoint Blockade Immunotherapy

por Bartlett, Bjarne, Gao, Zitong, Schukking, Monique, Menor, Mark, Khadka, Vedbar S., Fabbri, Muller, Fei, Peiwen, Deng, Youping
Publicado 2021

Adaptive Thermogenesis in a Mouse Model Lacking Selenoprotein Biosynthesis in Brown Adipocytes

por Seale, Lucia A., Ogawa-Wong, Ashley N., Watanabe, Ligia M., Khadka, Vedbar S., Menor, Mark, Torres, Daniel J., Carlson, Bradley A., Hatfield, Dolph L., Berry, Marla J.
Publicado 2021

Combined Omics Reveals That Disruption of the Selenocysteine Lyase Gene Affects Amino Acid Pathways in Mice

por Seale, Lucia A., Khadka, Vedbar S., Menor, Mark, Xie, Guoxiang, Watanabe, Ligia M., Sasuclark, Alexandru, Guirguis, Kyrillos, Ha, Herena Y., Hashimoto, Ann C., Peplowska, Karolina, Tiirikainen, Maarit, Jia, Wei, Berry, Marla J., Deng, Youping
Publicado 2019

Multi-antigen Vaccination With Simultaneous Engagement of the OX40 Receptor Delays Malignant Mesothelioma Growth and Increases Survival in Animal Models

por Hoffmann, Peter R., Hoffmann, Fukun W., Premeaux, Thomas A., Fujita, Tsuyoshi, Soprana, Elisa, Panigada, Maddalena, Chew, Glen M., Richard, Guilhem, Hindocha, Pooja, Menor, Mark, Khadka, Vedbar S., Deng, Youping, Moise, Lenny, Ndhlovu, Lishomwa C., Siccardi, Antonio, Weinberg, Andrew D., De Groot, Anne S., Bertino, Pietro
Publicado 2019

The SEQC2 epigenomics quality control (EpiQC) study

por Foox, Jonathan, Nordlund, Jessica, Lalancette, Claudia, Gong, Ting, Lacey, Michelle, Lent, Samantha, Langhorst, Bradley W., Ponnaluri, V. K. Chaithanya, Williams, Louise, Padmanabhan, Karthik Ramaswamy, Cavalcante, Raymond, Lundmark, Anders, Butler, Daniel, Mozsary, Christopher, Gurvitch, Justin, Greally, John M., Suzuki, Masako, Menor, Mark, Nasu, Masaki, Alonso, Alicia, Sheridan, Caroline, Scherer, Andreas, Bruinsma, Stephen, Golda, Gosia, Muszynska, Agata, Łabaj, Paweł P., Campbell, Matthew A., Wos, Frank, Raine, Amanda, Liljedahl, Ulrika, Axelsson, Tomas, Wang, Charles, Chen, Zhong, Yang, Zhaowei, Li, Jing, Yang, Xiaopeng, Wang, Hongwei, Melnick, Ari, Guo, Shang, Blume, Alexander, Franke, Vedran, Ibanez de Caceres, Inmaculada, Rodriguez-Antolin, Carlos, Rosas, Rocio, Davis, Justin Wade, Ishii, Jennifer, Megherbi, Dalila B., Xiao, Wenming, Liao, Will, Xu, Joshua, Hong, Huixiao, Ning, Baitang, Tong, Weida, Akalin, Altuna, Wang, Yunliang, Deng, Youping, Mason, Christopher E.
Publicado 2021

Author Correction: The SEQC2 epigenomics quality control (EpiQC) study

por Foox, Jonathan, Nordlund, Jessica, Lalancette, Claudia, Gong, Ting, Lacey, Michelle, Lent, Samantha, Langhorst, Bradley W., Ponnaluri, V. K. Chaithanya, Williams, Louise, Padmanabhan, Karthik Ramaswamy, Cavalcante, Raymond, Lundmark, Anders, Butler, Daniel, Mozsary, Christopher, Gurvitch, Justin, Greally, John M., Suzuki, Masako, Menor, Mark, Nasu, Masaki, Alonso, Alicia, Sheridan, Caroline, Scherer, Andreas, Bruinsma, Stephen, Golda, Gosia, Muszynska, Agata, Łabaj, Paweł P., Campbell, Matthew A., Wos, Frank, Raine, Amanda, Liljedahl, Ulrika, Axelsson, Tomas, Wang, Charles, Chen, Zhong, Yang, Zhaowei, Li, Jing, Yang, Xiaopeng, Wang, Hongwei, Melnick, Ari, Guo, Shang, Blume, Alexander, Franke, Vedran, de Caceres, Inmaculada Ibanez, Rodriguez-Antolin, Carlos, Rosas, Rocio, Davis, Justin Wade, Ishii, Jennifer, Megherbi, Dalila B., Xiao, Wenming, Liao, Will, Xu, Joshua, Hong, Huixiao, Ning, Baitang, Tong, Weida, Akalin, Altuna, Wang, Yunliang, Deng, Youping, Mason, Christopher E.
Publicado 2021