Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

por Thorvaldsdóttir, Helga, Robinson, James T., Mesirov, Jill P.
Publicado 2013

An accessible GenePattern notebook for the copy number variation analysis of Illumina Infinium DNA methylation arrays

por Mah, Clarence K., Mesirov, Jill P., Chavez, Lukas
Publicado 2018

A genomic data viewer for iPad

por Thorvaldsdóttir, Helga, Robinson, James T, Turner, Douglass, Mesirov, Jill P
Publicado 2015

igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)

por Robinson, James T, Thorvaldsdottir, Helga, Turner, Douglass, Mesirov, Jill P
Publicado 2022

A Genome-Wide siRNA Screen in Mammalian Cells for Regulators of S6 Phosphorylation

por Papageorgiou, Angela, Rapley, Joseph, Mesirov, Jill P., Tamayo, Pablo, Avruch, Joseph
Publicado 2015

ISMB 2008 Toronto

por Linial, Michal, Mesirov, Jill P., Morrison McKay, B. J., Rost, Burkhard
Publicado 2008

Compression of Structured High-Throughput Sequencing Data

por Campagne, Fabien, Dorff, Kevin C., Chambwe, Nyasha, Robinson, James T., Mesirov, Jill P.
Publicado 2013

Constellation Map: Downstream visualization and interpretation of gene set enrichment results

por Tan, Yan, Wu, Felix, Tamayo, Pablo, Haining, W. Nicholas, Mesirov, Jill P.
Publicado 2015

Subclass Mapping: Identifying Common Subtypes in Independent Disease Data Sets

por Hoshida, Yujin, Brunet, Jean-Philippe, Tamayo, Pablo, Golub, Todd R., Mesirov, Jill P.
Publicado 2007

MEDB-66. Investigating intra-tumoral heterogeneity of extrachromosomal DNA in SHH medulloblastoma

por Chapman, Owen, Sridhar, Sunita, Wechsler-Reya, Robert J, Chavez, Lukas, Mesirov, Jill P
Publicado 2022

Integrative Genomics Viewer

por Robinson, James T., Thorvaldsdóttir, Helga, Winckler, Wendy, Guttman, Mitchell, Lander, Eric S., Getz, Gad, Mesirov, Jill P.
Publicado 2011

Cytoscape: the network visualization tool for GenomeSpace workflows

por Demchak, Barry, Hull, Tim, Reich, Michael, Liefeld, Ted, Smoot, Michael, Ideker, Trey, Mesirov, Jill P.
Publicado 2014

Juicebox.js Provides a Cloud-Based Visualization System for Hi-C Data

por Robinson, James T., Turner, Douglass, Durand, Neva C., Thorvaldsdóttir, Helga, Mesirov, Jill P., Aiden, Erez Lieberman
Publicado 2018

An accessible, interactive GenePattern Notebook for analysis and exploration of single-cell transcriptomic data

por Mah, Clarence K., Wenzel, Alexander T., Juarez, Edwin F., Tabor, Thorin, Reich, Michael M., Mesirov, Jill P.
Publicado 2019

A phenotypically supervised single-cell analysis protocol to study within-cell-type heterogeneity of cultured mammalian cells

por Chen, Kevin, Ozturk, Kivilcim, Liefeld, Ted, Reich, Michael, Mesirov, Jill P., Carter, Hannah, Fraley, Stephanie I.
Publicado 2021

Genomics to Notebook (g2nb): extending the electronic notebook to address the challenges of bioinformatics analysis

por Reich, Michael, Tabor, Thorin, Liefeld, John, Joshi, Jayadev, Kim, Forrest, Thorvaldsdottir, Helga, Blankenberg, Daniel, Mesirov, Jill P.
Publicado 2023

Prediction of response to therapy with ezatiostat in lower risk myelodysplastic syndrome

por Galili, Naomi, Tamayo, Pablo, Botvinnik, Olga B, Mesirov, Jill P, Brooks, Margarita R, Brown, Gail, Raza, Azra
Publicado 2012

Portraits of breast cancer progression

por Dalgin, Gul S, Alexe, Gabriela, Scanfeld, Daniel, Tamayo, Pablo, Mesirov, Jill P, Ganesan, Shridar, DeLisi, Charles, Bhanot, Gyan
Publicado 2007

NMFClustering: Accessible NMF-based clustering utilizing GPU acceleration

por Liefeld, Ted, Huang, Edwin, Wenzel, Alexander T., Yoshimoto, Kenneth, Sharma, Ashwyn K, Sicklick, Jason K, Mesirov, Jill P, Reich, Michael
Publicado 2023

Single-cell characterization of step-wise acquisition of carboplatin resistance in ovarian cancer

por Wenzel, Alexander T., Champa, Devora, Venkatesh, Hrishi, Sun, Si, Tsai, Cheng-Yu, Mesirov, Jill P., Bui, Jack D., Howell, Stephen B., Harismendy, Olivier
Publicado 2022