Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015–2016

por Chochua, Sopio, Metcalf, Benjamin J., Li, Zhongya, Walker, Hollis, Tran, Theresa, McGee, Lesley, Beall, Bernard
Publicado 2017

Expansion of Invasive Group A Streptococcus M1(UK) Lineage in Active Bacterial Core Surveillance, United States, 2019‒2021

por Li, Yuan, Rivers, Joy, Mathis, Saundra, Li, Zhongya, Chochua, Sopio, Metcalf, Benjamin J., Beall, Bernard, Onukwube, Jennifer, Gregory, Christopher J., McGee, Lesley
Publicado 2023

Emergent Invasive Group A Streptococcus dysgalactiae subsp. equisimilis, United States, 2015–2018

por Chochua, Sopio, Rivers, Joy, Mathis, Saundra, Li, Zhongya, Velusamy, Srinivasan, McGee, Lesley, Van Beneden, Chris, Li, Yuan, Metcalf, Benjamin J., Beall, Bernard
Publicado 2019

Validation of β-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences

por Li, Yuan, Metcalf, Benjamin J., Chochua, Sopio, Li, Zhongya, Gertz, Robert E., Walker, Hollis, Hawkins, Paulina A., Tran, Theresa, McGee, Lesley, Beall, Bernard W.
Publicado 2017

A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015–2016

por Beall, Bernard, Chochua, Sopio, Gertz, Robert E., Li, Yuan, Li, Zhongya, McGee, Lesley, Metcalf, Benjamin J., Ricaldi, Jessica, Tran, Theresa, Walker, Hollis, Pilishvili, Tamara
Publicado 2018

Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis

por Li, Yuan, Metcalf, Benjamin J., Chochua, Sopio, Li, Zhongya, Walker, Hollis, Tran, Theresa, Hawkins, Paulina A., Gierke, Ryan, Pilishvili, Tamara, McGee, Lesley, Beall, Bernard W.
Publicado 2019

Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting β-Lactam Resistance Levels in Streptococcus pneumoniae

por Li, Yuan, Metcalf, Benjamin J., Chochua, Sopio, Li, Zhongya, Gertz, Robert E., Walker, Hollis, Hawkins, Paulina A., Tran, Theresa, Whitney, Cynthia G., McGee, Lesley, Beall, Bernard W.
Publicado 2016

Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing

por Hawkins, Paulina, Mercado, Erik, Chochua, Sopio, Castillo, Maria E., Reyes, Isabel, Chaparro, Eduardo, Gladstone, Rebecca, Bentley, Stephen D., Breiman, Robert F., Metcalf, Benjamin J., Beall, Bernard, Ochoa, Theresa J., McGee, Lesley
Publicado 2017

Genomic Surveillance of Streptococcus pyogenes Strains Causing Invasive Disease, United States, 2016–2017

por Li, Yuan, Rivers, Joy, Mathis, Saundra, Li, Zhongya, Velusamy, Srinivasan, Nanduri, Srinivas A., Van Beneden, Chris A., Snippes-Vagnone, Paula, Lynfield, Ruth, McGee, Lesley, Chochua, Sopio, Metcalf, Benjamin J., Beall, Bernard
Publicado 2020

vanG Element Insertions within a Conserved Chromosomal Site Conferring Vancomycin Resistance to Streptococcus agalactiae and Streptococcus anginosus

por Srinivasan, Velusamy, Metcalf, Benjamin J., Knipe, Kristen M., Ouattara, Mahamoudou, McGee, Lesley, Shewmaker, Patricia L., Glennen, Anita, Nichols, Megin, Harris, Carol, Brimmage, Mary, Ostrowsky, Belinda, Park, Connie J., Schrag, Stephanie J., Frace, Michael A., Sammons, Scott A., Beall, Bernard
Publicado 2014

Benchmark datasets for SARS-CoV-2 surveillance bioinformatics

por Xiaoli, Lingzi, Hagey, Jill V., Park, Daniel J., Gulvik, Christopher A., Young, Erin L., Alikhan, Nabil-Fareed, Lawsin, Adrian, Hassell, Norman, Knipe, Kristen, Oakeson, Kelly F., Retchless, Adam C., Shakya, Migun, Lo, Chien-Chi, Chain, Patrick, Page, Andrew J., Metcalf, Benjamin J., Su, Michelle, Rowell, Jessica, Vidyaprakash, Eshaw, Paden, Clinton R., Huang, Andrew D., Roellig, Dawn, Patel, Ketan, Winglee, Kathryn, Weigand, Michael R., Katz, Lee S.
Publicado 2022

Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci

por Azarian, Taj, Mitchell, Patrick K., Georgieva, Maria, Thompson, Claudette M., Ghouila, Amel, Pollard, Andrew J., von Gottberg, Anne, du Plessis, Mignon, Antonio, Martin, Kwambana-Adams, Brenda A., Clarke, Stuart C., Everett, Dean, Cornick, Jennifer, Sadowy, Ewa, Hryniewicz, Waleria, Skoczynska, Anna, Moïsi, Jennifer C., McGee, Lesley, Beall, Bernard, Metcalf, Benjamin J., Breiman, Robert F., Ho, PL, Reid, Raymond, O’Brien, Katherine L., Gladstone, Rebecca A., Bentley, Stephen D., Hanage, William P.
Publicado 2018

A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa

por Lo, Stephanie W, Gladstone, Rebecca A, van Tonder, Andries J, Du Plessis, Mignon, Cornick, Jennifer E, Hawkins, Paulina A, Madhi, Shabir A, Nzenze, Susan A, Kandasamy, Rama, Ravikumar, K L, Elmdaghri, Naima, Kwambana-Adams, Brenda, Almeida, Samanta Cristine Grassi, Skoczynska, Anna, Egorova, Ekaterina, Titov, Leonid, Saha, Samir K, Paragi, Metka, Everett, Dean B, Antonio, Martin, Klugman, Keith P, Li, Yuan, Metcalf, Benjamin J, Beall, Bernard, McGee, Lesley, Breiman, Robert F, Bentley, Stephen D, von Gottberg, Anne
Publicado 2020

Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates

por Gladstone, Rebecca A., Lo, Stephanie W., Goater, Richard, Yeats, Corin, Taylor, Ben, Hadfield, James, Lees, John A., Croucher, Nicholas J., van Tonder, Andries J., Bentley, Leon J., Quah, Fu Xiang, Blaschke, Anne J., Pershing, Nicole L., Byington, Carrie L., Balaji, Veeraraghavan, Hryniewicz, Waleria, Sigauque, Betuel, Ravikumar, K.L., Almeida, Samanta Cristine Grassi, Ochoa, Theresa J., Ho, Pak Leung, du Plessis, Mignon, Ndlangisa, Kedibone M., Cornick, Jennifer E., Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A., Madhi, Shabir A., Hawkins, Paulina A., Pollard, Andrew J., Everett, Dean B., Antonio, Martin, Dagan, Ron, Klugman, Keith P., von Gottberg, Anne, Metcalf, Benjamin J., Li, Yuan, Beall, Bernard W., McGee, Lesley, Breiman, Robert F., Aanensen, David M., Bentley, Stephen D.
Publicado 2020