CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome

por Stern, Adi, Mick, Eran, Tirosh, Itay, Sagy, Or, Sorek, Rotem
Publicado 2012

Exploring the In Vivo Role of the Mitochondrial Calcium Uniporter in Brown Fat Bioenergetics

por Flicker, Daniel, Sancak, Yasemin, Mick, Eran, Goldberger, Olga, Mootha, Vamsi K.
Publicado 2019

Distinct mitochondrial defects trigger the integrated stress response depending on the metabolic state of the cell

por Mick, Eran, Titov, Denis V, Skinner, Owen S, Sharma, Rohit, Jourdain, Alexis A, Mootha, Vamsi K
Publicado 2020

Comparative transcriptomics across the prokaryotic tree of life

por Cohen, Ofir, Doron, Shany, Wurtzel, Omri, Dar, Daniel, Edelheit, Sarit, Karunker, Iris, Mick, Eran, Sorek, Rotem
Publicado 2016

The antibiotic resistance reservoir of the lung microbiome expands with age

por Chu, Victoria T., Tsitsiklis, Alexandra, Mick, Eran, Ambroggio, Lilliam, Kalantar, Katrina L., Glascock, Abigail, Osborne, Christina M., Wagner, Brandie D., Matthay, Michael A., DeRisi, Joseph L., Calfee, Carolyn S., Mourani, Peter M., Langelier, Charles R.
Publicado 2023

Early loss of mitochondrial complex I and rewiring of glutathione metabolism in renal oncocytoma

por Gopal, Raj K., Calvo, Sarah E., Shih, Angela R., Chaves, Frances L., McGuone, Declan, Mick, Eran, Pierce, Kerry A., Li, Yang, Garofalo, Andrea, Van Allen, Eliezer M., Clish, Clary B., Oliva, Esther, Mootha, Vamsi K.
Publicado 2018

A 2-Gene Host Signature for Improved Accuracy of COVID-19 Diagnosis Agnostic to Viral Variants

por Albright, Jack, Mick, Eran, Sanchez-Guerrero, Estella, Kamm, Jack, Mitchell, Anthea, Detweiler, Angela M., Neff, Norma, Tsitsiklis, Alexandra, Hayakawa Serpa, Paula, Ratnasiri, Kalani, Havlir, Diane, Kistler, Amy, DeRisi, Joseph L., Pisco, Angela Oliveira, Langelier, Charles R.
Publicado 2022

Upper airway gene expression reveals a more robust innate and adaptive immune response to SARS-CoV-2 in children compared with older adults

por Mick, Eran, Tsitsiklis, Alexandra, Spottiswoode, Natasha, Caldera, Saharai, Serpa, Paula Hayakawa, Detweiler, Angela M., Neff, Norma, Pisco, Angela Oliveira, Li, Lucy M., Retallack, Hanna, Ratnasiri, Kalani, Williamson, Kayla M., Soesanto, Victoria, Simões, Eric A. F., Kistler, Amy, Wagner, Brandie D., DeRisi, Joseph L., Ambroggio, Lilliam, Mourani, Peter M., Langelier, Charles R.
Publicado 2021

Integrated host/microbe metagenomics enables accurate lower respiratory tract infection diagnosis in critically ill children

por Mick, Eran, Tsitsiklis, Alexandra, Kamm, Jack, Kalantar, Katrina L., Caldera, Saharai, Lyden, Amy, Tan, Michelle, Detweiler, Angela M., Neff, Norma, Osborne, Christina M., Williamson, Kayla M., Soesanto, Victoria, Leroue, Matthew, Maddux, Aline B., Simões, Eric A.F., Carpenter, Todd C., Wagner, Brandie D., DeRisi, Joseph L., Ambroggio, Lilliam, Mourani, Peter M., Langelier, Charles R.
Publicado 2023

Upper airway gene expression differentiates COVID-19 from other acute respiratory illnesses and reveals suppression of innate immune responses by SARS-CoV-2

por Mick, Eran, Kamm, Jack, Pisco, Angela Oliveira, Ratnasiri, Kalani, Babik, Jennifer M., Calfee, Carolyn S., Castañeda, Gloria, DeRisi, Joseph L., Detweiler, Angela M., Hao, Samantha, Kangelaris, Kirsten N., Kumar, G. Renuka, Li, Lucy M., Mann, Sabrina A., Neff, Norma, Prasad, Priya A., Serpa, Paula Hayakawa, Shah, Sachin J., Spottiswoode, Natasha, Tan, Michelle, Christenson, Stephanie A., Kistler, Amy, Langelier, Charles
Publicado 2020

Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children

por Mick, Eran, Tsitsiklis, Alexandra, Spottiswoode, Natasha, Caldera, Saharai, Serpa, Paula Hayakawa, Detweiler, Angela M., Neff, Norma, Pisco, Angela Oliveira, Li, Lucy M., Retallack, Hanna, Ratnasiri, Kalani, Williamson, Kayla M., Soesanto, Victoria, Simões, Eric A. F., Smith, Christiana, Abuogi, Lisa, Kistler, Amy, Wagner, Brandie D., DeRisi, Joseph L., Ambroggio, Lilliam, Mourani, Peter M., Langelier, Charles R.
Publicado 2022

Integrated host-microbe plasma metagenomics for sepsis diagnosis in a prospective cohort of critically ill adults

por Kalantar, Katrina L., Neyton, Lucile, Abdelghany, Mazin, Mick, Eran, Jauregui, Alejandra, Caldera, Saharai, Serpa, Paula Hayakawa, Ghale, Rajani, Albright, Jack, Sarma, Aartik, Tsitsiklis, Alexandra, Leligdowicz, Aleksandra, Christenson, Stephanie A., Liu, Kathleen, Kangelaris, Kirsten N., Hendrickson, Carolyn, Sinha, Pratik, Gomez, Antonio, Neff, Norma, Pisco, Angela, Doernberg, Sarah B., Derisi, Joseph L., Matthay, Michael A., Calfee, Carolyn S., Langelier, Charles R.
Publicado 2022

Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses

por Mick, Eran, Kamm, Jack, Pisco, Angela Oliveira, Ratnasiri, Kalani, Babik, Jennifer M., Castañeda, Gloria, DeRisi, Joseph L., Detweiler, Angela M., Hao, Samantha L., Kangelaris, Kirsten N., Kumar, G. Renuka, Li, Lucy M., Mann, Sabrina A., Neff, Norma, Prasad, Priya A., Serpa, Paula Hayakawa, Shah, Sachin J., Spottiswoode, Natasha, Tan, Michelle, Calfee, Carolyn S., Christenson, Stephanie A., Kistler, Amy, Langelier, Charles
Publicado 2020

SARS-CoV-2 infection studies in lung organoids identify TSPAN8 as novel mediator

por Hysenaj, Lisiena, Little, Samantha, Kulhanek, Kayla, Gbenedio, Oghenekevwe M., Rodriguez, Lauren, Shen, Alan, Lone, Jean-Christophe, Lupin-Jimenez, Leonard C., Bonser, Luke R., Serwas, Nina K., Bahl, Kriti, Mick, Eran, Li, Jack Z., Ding, Vivianne W., Matsumoto, Shotaro, Maishan, Mazharul, Simoneau, Camille, Fragiadakis, Gabriela, Jablons, David M., Langelier, Charles R., Matthay, Michael, Ott, Melanie, Krummel, Matthew, Combes, Alexis J., Sil, Anita, Erle, David J., Kratz, Johannes R., Roose, Jeroen P.
Publicado 2021

COVID-19 ARDS is characterized by a dysregulated host response that differs from cytokine storm and is modified by dexamethasone

por Sarma, Aartik, Christenson, Stephanie A., Mick, Eran, DeVoe, Catherine, Deiss, Thomas, Pisco, Angela Oliveira, Ghale, Rajani, Jauregui, Alejandra, Byrne, Ashley, Moazed, Farzad, Spottiswoode, Natasha, Sinha, Pratik, Zha, Beth Shoshana, Neff, Norma, Tan, Michelle, Serpa, Paula Hayakawa, Ansel, K. Mark, Wilson, Jennifer G., Leligdowicz, Aleksandra, Siegel, Emily R., Sirota, Marina, DeRisi, Joseph L., Matthay, Michael A., Hendrickson, Carolyn M., Kangelaris, Kirsten N., Krummel, Matthew F., Woodruff, Prescott G., Erle, David J., Calfee, Carolyn S., Langelier, Charles R.
Publicado 2021

Impaired immune signaling and changes in the lung microbiome precede secondary bacterial pneumonia in COVID-19

por Tsitsiklis, Alexandra, Zha, Beth Shoshana, Byrne, Ashley, Devoe, Catherine, Levan, Sophia, Rackaityte, Elze, Sunshine, Sara, Mick, Eran, Ghale, Rajani, Jauregui, Alejandra, Sarma, Aartik, Neff, Norma, Serpa, Paula Hayakawa, Deiss, Thomas J., Kistler, Amy, Carrillo, Sidney, Ansel, K. Mark, Leligdowicz, Aleksandra, Christenson, Stephanie, Jones, Norman, Wu, Bing, Darmanis, Spyros, Matthay, Michael A., Lynch, Susan V., DeRisi, Joseph L., Hendrickson, Carolyn M., Kangelaris, Kirsten N., Krummel, Matthew F., Woodruff, Prescott G., Erle, David J., Rosenberg, Oren, Calfee, Carolyn S., Langelier, Charles R.
Publicado 2021

Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

por Sarma, Aartik, Christenson, Stephanie A., Byrne, Ashley, Mick, Eran, Pisco, Angela Oliveira, DeVoe, Catherine, Deiss, Thomas, Ghale, Rajani, Zha, Beth Shoshana, Tsitsiklis, Alexandra, Jauregui, Alejandra, Moazed, Farzad, Detweiler, Angela M., Spottiswoode, Natasha, Sinha, Pratik, Neff, Norma, Tan, Michelle, Serpa, Paula Hayakawa, Willmore, Andrew, Ansel, K. Mark, Wilson, Jennifer G., Leligdowicz, Aleksandra, Siegel, Emily R., Sirota, Marina, DeRisi, Joseph L., Matthay, Michael A., Hendrickson, Carolyn M., Kangelaris, Kirsten N., Krummel, Matthew F., Woodruff, Prescott G., Erle, David J., Calfee, Carolyn S., Langelier, Charles R.
Publicado 2021

SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants

por Hysenaj, Lisiena, Little, Samantha, Kulhanek, Kayla, Magnen, Melia, Bahl, Kriti, Gbenedio, Oghenekevwe M., Prinz, Morgan, Rodriguez, Lauren, Andersen, Christopher, Rao, Arjun Arkal, Shen, Alan, Lone, Jean-Christophe, Lupin-Jimenez, Leonard C., Bonser, Luke R., Serwas, Nina K., Mick, Eran, Khalid, Mir M., Taha, Taha Y., Kumar, Renuka, Li, Jack Z., Ding, Vivianne W., Matsumoto, Shotaro, Maishan, Mazharul, Sreekumar, Bharath, Simoneau, Camille, Nazarenko, Irina, Tomlinson, Michael G., Khan, Khajida, von Gottberg, Anne, Sigal, Alex, Looney, Mark R., Fragiadakis, Gabriela K., Jablons, David M., Langelier, Charles R., Matthay, Michael, Krummel, Matthew, Erle, David J., Combes, Alexis J., Sil, Anita, Ott, Melanie, Kratz, Johannes R., Roose, Jeroen P.
Publicado 2023

Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19

por Shah, Sachin J., Barish, Peter N., Prasad, Priya A., Kistler, Amy, Neff, Norma, Kamm, Jack, Li, Lucy M., Chiu, Charles Y., Babik, Jennifer M., Fang, Margaret C., Abe-Jones, Yumiko, Alipanah, Narges, Alvarez, Francisco N., Botvinnik, Olga Borisovna, Castaneda, Gloria, Dadasovich, Rand M., Davis, Jennifer, Deng, Xianding, DeRisi, Joseph L., Detweiler, Angela M., Federman, Scot, Haliburton, John, Hao, Samantha, Kerkhoff, Andrew D., Kumar, G. Renuka, Malcolm, Katherine B., Mann, Sabrina A., Martinez, Sandra, Mary, Rupa K., Mick, Eran, Mwakibete, Lusajo, Najafi, Nader, Peluso, Michael J., Phelps, Maira, Pisco, Angela Oliveira, Ratnasiri, Kalani, Rubio, Luis A., Sellas, Anna, Sherwood, Kyla D., Sheu, Jonathan, Spottiswoode, Natasha, Tan, Michelle, Yu, Guixia, Kangelaris, Kirsten Neudoerffer, Langelier, Charles
Publicado 2020

A myeloid program associated with COVID-19 severity is decreased by therapeutic blockade of IL-6 signaling

por Hackney, Jason A., Shivram, Haridha, Vander Heiden, Jason, Overall, Chris, Orozco, Luz, Gao, Xia, Kim, Eugene, West, Nathan, Qamra, Aditi, Chang, Diana, Chakrabarti, Arindam, Choy, David F., Combes, Alexis J., Courau, Tristan, Fragiadakis, Gabriela K., Rao, Arjun Arkal, Ray, Arja, Tsui, Jessica, Hu, Kenneth, Kuhn, Nicholas F., Krummel, Matthew F., Erle, David J., Kangelaris, Kirsten, Sarma, Aartik, Lyon, Zoe, Calfee, Carolyn S., Woodruff, Prescott G., Ghale, Rajani, Mick, Eran, Byrne, Ashley, Zha, Beth Shoshana, Langelier, Charles, Hendrickson, Carolyn M., van der Wijst, Monique G.P., Hartoularos, George C., Grant, Tianna, Bueno, Raymund, Lee, David S., Greenland, John R., Sun, Yang, Perez, Richard, Ogorodnikov, Anton, Ward, Alyssa, Ye, Chun Jimmie, Ramalingam, Thiru, McBride, Jacqueline M., Cai, Fang, Teterina, Anastasia, Bao, Min, Tsai, Larry, Rosas, Ivan O., Regev, Aviv, Kapadia, Sharookh B., Bauer, Rebecca N., Rosenberger, Carrie M.
Publicado 2023