QBiC-Pred: quantitative predictions of transcription factor binding changes due to sequence variants

por Martin, Vincentius, Zhao, Jingkang, Afek, Ariel, Mielko, Zachery, Gordân, Raluca
Publicado 2019

ngn-1/neurogenin Activates Transcription of Multiple Terminal Selector Transcription Factors in the Caenorhabditis elegans Nervous System

por Christensen, Elyse L., Beasley, Alexandra, Radchuk, Jessica, Mielko, Zachery E., Preston, Elicia, Stuckett, Sidney, Murray, John I., Hudson, Martin L.
Publicado 2020

cnd-1/NeuroD1 Functions with the Homeobox Gene ceh-5/Vax2 and Hox Gene ceh-13/labial To Specify Aspects of RME and DD Neuron Fate in Caenorhabditis elegans

por Aquino-Nunez, Wendy, Mielko, Zachery E., Dunn, Trae, Santorella, Elise M., Hosea, Ciara, Leitner, Lauren, McCalla, Derrica, Simms, Claire, Verola, Wendy M., Vijaykumar, Sharanya, Hudson, Martin L.
Publicado 2020

UV irradiation remodels the specificity landscape of transcription factors

por Mielko, Zachery, Zhang, Yuning, Sahay, Harshit, Liu, Yiling, Schaich, Matthew A., Schnable, Brittani, Morrison, Abigail M., Burdinski, Debbie, Adar, Sheera, Pufall, Miles, Van Houten, Bennett, Gordân, Raluca, Afek, Ariel
Publicado 2023

DNA mismatches reveal conformational penalties in protein-DNA recognition

por Afek, Ariel, Shi, Honglue, Rangadurai, Atul, Sahay, Harshit, Senitzki, Alon, Xhani, Suela, Fang, Mimi, Salinas, Raul, Mielko, Zachery, Pufall, Miles A., Poon, Gregory M.K., Haran, Tali E., Schumacher, Maria A., Al-Hashimi, Hashim M., Gordan, Raluca
Publicado 2020