High-throughput in vivo mapping of RNA accessible interfaces to identify functional sRNA binding sites

por Mihailovic, Mia K., Vazquez-Anderson, Jorge, Li, Yan, Fry, Victoria, Vimalathas, Praveen, Herrera, Daniel, Lease, Richard A., Powell, Warren B., Contreras, Lydia M.
Publicado 2018

Optimization of a novel biophysical model using large scale in vivo antisense hybridization data displays improved prediction capabilities of structurally accessible RNA regions

por Vazquez-Anderson, Jorge, Mihailovic, Mia K., Baldridge, Kevin C., Reyes, Kristofer G., Haning, Katie, Cho, Seung Hee, Amador, Paul, Powell, Warren B., Contreras, Lydia M.
Publicado 2017

CsrA Shows Selective Regulation of sRNA-mRNA Networks

por Rojano-Nisimura, Alejandra Matsuri, Simmons, Trevor R., Leistra, Abigail N., Mihailovic, Mia K., Buchser, Ryan, Ekdahl, Alyssa M., Joseph, Isabella, Curtis, Nicholas C., Contreras, Lydia M.
Publicado 2023

Uncovering Transcriptional Regulators and Targets of sRNAs Using an Integrative Data-Mining Approach: H-NS-Regulated RseX as a Case Study

por Mihailovic, Mia K., Ekdahl, Alyssa M., Chen, Angela, Leistra, Abigail N., Li, Bridget, González Martínez, Javier, Law, Matthew, Ejindu, Cindy, Massé, Éric, Freddolino, Peter L., Contreras, Lydia M.
Publicado 2021