Assessing the Biological Significance of Gene Expression Signatures and Co-Expression Modules by Studying Their Network Properties

por Minguez, Pablo, Dopazo, Joaquin
Publicado 2011

A global map of associations between types of protein posttranslational modifications and human genetic diseases

por Vellosillo, Perceval, Minguez, Pablo
Publicado 2021

PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins

por Minguez, Pablo, Letunic, Ivica, Parca, Luca, Bork, Peer
Publicado 2013

Gene set internal coherence in the context of functional profiling

por Montaner, David, Minguez, Pablo, Al-Shahrour, Fátima, Dopazo, Joaquín
Publicado 2009

Annotation of the M. tuberculosis Hypothetical Orfeome: Adding Functional Information to More than Half of the Uncharacterized Proteins

por Doerks, Tobias, van Noort, Vera, Minguez, Pablo, Bork, Peer
Publicado 2012

OGEE: an online gene essentiality database

por Chen, Wei-Hua, Minguez, Pablo, Lercher, Martin J., Bork, Peer
Publicado 2012

SNOW, a web-based tool for the statistical analysis of protein–protein interaction networks

por Minguez, Pablo, Götz, Stefan, Montaner, David, Al-Shahrour, Fatima, Dopazo, Joaquin
Publicado 2009

VIsoQLR: an interactive tool for the detection, quantification and fine-tuning of isoforms in selected genes using long-read sequencing

por Núñez-Moreno, Gonzalo, Tamayo, Alejandra, Ruiz-Sánchez, Carolina, Cortón, Marta, Mínguez, Pablo
Publicado 2023

Correction: VIsoQLR: an interactive tool for the detection, quantification and fine-tuning of isoforms in selected genes using long-read sequencing

por Núñez-Moreno, Gonzalo, Tamayo, Alejandra, Ruiz-Sánchez, Carolina, Cortón, Marta, Mínguez, Pablo
Publicado 2023

BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments

por Al-Shahrour, Fátima, Minguez, Pablo, Vaquerizas, Juan M., Conde, Lucía, Dopazo, Joaquín
Publicado 2005

Selection upon Genome Architecture: Conservation of Functional Neighborhoods with Changing Genes

por Al-Shahrour, Fátima, Minguez, Pablo, Marqués-Bonet, Tomás, Gazave, Elodie, Navarro, Arcadi, Dopazo, Joaquín
Publicado 2010

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments

por Al-Shahrour, Fátima, Minguez, Pablo, Tárraga, Joaquín, Medina, Ignacio, Alloza, Eva, Montaner, David, Dopazo, Joaquín
Publicado 2007

From genes to functional classes in the study of biological systems

por Al-Shahrour, Fátima, Arbiza, Leonardo, Dopazo, Hernán, Huerta-Cepas, Jaime, Mínguez, Pablo, Montaner, David, Dopazo, Joaquín
Publicado 2007

PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins

por Minguez, Pablo, Letunic, Ivica, Parca, Luca, Garcia-Alonso, Luz, Dopazo, Joaquin, Huerta-Cepas, Jaime, Bork, Peer
Publicado 2014

Discovering the hidden sub-network component in a ranked list of genes or proteins derived from genomic experiments

por García-Alonso, Luz, Alonso, Roberto, Vidal, Enrique, Amadoz, Alicia, de María, Alejandro, Minguez, Pablo, Medina, Ignacio, Dopazo, Joaquín
Publicado 2012

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data

por Vaquerizas, Juan M., Conde, Lucía, Yankilevich, Patricio, Cabezón, Amaya, Minguez, Pablo, Díaz-Uriarte, Ramón, Al-Shahrour, Fátima, Herrero, Javier, Dopazo, Joaquín
Publicado 2005

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments

por Al-Shahrour, Fátima, Carbonell, José, Minguez, Pablo, Goetz, Stefan, Conesa, Ana, Tárraga, Joaquín, Medina, Ignacio, Alloza, Eva, Montaner, David, Dopazo, Joaquín
Publicado 2008

Prioritizing Molecular Biomarkers in Asthma and Respiratory Allergy Using Systems Biology

por Cremades-Jimeno, Lucía, de Pedro, María Ángeles, López-Ramos, María, Sastre, Joaquín, Mínguez, Pablo, Fernández, Ignacio Mahillo, Baos, Selene, Cárdaba, Blanca
Publicado 2021

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments

por Al-Shahrour, Fátima, Minguez, Pablo, Tárraga, Joaquín, Montaner, David, Alloza, Eva, Vaquerizas, Juan M., Conde, Lucía, Blaschke, Christian, Vera, Javier, Dopazo, Joaquín
Publicado 2006

Deciphering a global network of functionally associated post-translational modifications

por Minguez, Pablo, Parca, Luca, Diella, Francesca, Mende, Daniel R, Kumar, Runjun, Helmer-Citterich, Manuela, Gavin, Anne-Claude, van Noort, Vera, Bork, Peer
Publicado 2012