Transcription factor regulation and chromosome dynamics during pseudohyphal growth

por Mayhew, David, Mitra, Robi D.
Publicado 2014

Mutation and expression analysis in medulloblastoma yields prognostic variants and a putative mechanism of disease for i17q tumors

por Bien-Willner, Gabriel A, Mitra, Robi D
Publicado 2014

Quantitative analysis of transcription factor binding and expression using calling cards reporter arrays

por Liu, Jiayue, Shively, Christian A, Mitra, Robi D
Publicado 2020

A systematic study of gene expression variation at single-nucleotide resolution reveals widespread regulatory roles for uAUGs

por Yun, Yue, Adesanya, T.M. Ayodele, Mitra, Robi D.
Publicado 2012

Gene Expression Analysis of Zebrafish Melanocytes, Iridophores, and Retinal Pigmented Epithelium Reveals Indicators of Biological Function and Developmental Origin

por Higdon, Charles W., Mitra, Robi D., Johnson, Stephen L.
Publicado 2013

Detection of Rare Genomic Variants from Pooled Sequencing Using SPLINTER

por Vallania, Francesco, Ramos, Enrique, Cresci, Sharon, Mitra, Robi D., Druley, Todd E.
Publicado 2012

High-throughput single-cell functional elucidation of neurodevelopmental disease–associated genes reveals convergent mechanisms altering neuronal differentiation

por Lalli, Matthew A., Avey, Denis, Dougherty, Joseph D., Milbrandt, Jeffrey, Mitra, Robi D.
Publicado 2020

Intra-tumor heterogeneity of MLH1 promoter methylation revealed by deep single molecule bisulfite sequencing

por Varley, Katherine E., Mutch, David G., Edmonston, Tina B., Goodfellow, Paul J., Mitra, Robi D.
Publicado 2009

Laser capture microdissection–reduced representation bisulfite sequencing (LCM-RRBS) maps changes in DNA methylation associated with gonadectomy-induced adrenocortical neoplasia in...

por Schillebeeckx, Maximiliaan, Schrade, Anja, Löbs, Ann-Kathrin, Pihlajoki, Marjut, Wilson, David B., Mitra, Robi D.
Publicado 2013

Transposase mapping identifies the genomic targets of BAP1 in uveal melanoma

por Yen, Matthew, Qi, Zongtai, Chen, Xuhua, Cooper, John A., Mitra, Robi D., Onken, Michael D.
Publicado 2018

Redesign of the monomer–monomer interface of Cre recombinase yields an obligate heterotetrameric complex

por Zhang, Chi, Myers, Connie A., Qi, Zongtai, Mitra, Robi D., Corbo, Joseph C., Havranek, James J.
Publicado 2015

ATHLATES: accurate typing of human leukocyte antigen through exome sequencing

por Liu, Chang, Yang, Xiao, Duffy, Brian, Mohanakumar, Thalachallour, Mitra, Robi D., Zody, Michael C., Pfeifer, John D.
Publicado 2013

Zinc cluster transcription factors frequently activate target genes using a non-canonical half-site binding mode

por Recio, Pamela S, Mitra, Nikhil J, Shively, Christian A, Song, David, Jaramillo, Grace, Lewis, Kristine Shady, Chen, Xuhua, Mitra, Robi D
Publicado 2023

Measuring transcription factor binding and gene expression using barcoded self-reporting transposon calling cards and transcriptomes

por Lalli, Matthew, Yen, Allen, Thopte, Urvashi, Dong, Fengping, Moudgil, Arnav, Chen, Xuhua, Milbrandt, Jeffrey, Dougherty, Joseph D, Mitra, Robi D
Publicado 2022

Sequencing of idiopathic pulmonary fibrosis-related genes reveals independent single gene associations

por Coghlan, Meghan A, Shifren, Adrian, Huang, Howard J, Russell, Tonya D, Mitra, Robi D, Zhang, Qunyuan, Wegner, Daniel J, Cole, F Sessions, Hamvas, Aaron
Publicado 2014

PDE7B Is a Novel, Prognostically Significant Mediator of Glioblastoma Growth Whose Expression Is Regulated by Endothelial Cells

por Brooks, Michael D., Jackson, Erin, Warrington, Nicole M., Luo, Jingqin, Forys, Jason T., Taylor, Sara, Mao, Diane D., Leonard, Jeffrey R., Kim, Albert H., Piwnica-Worms, David, Mitra, Robi D., Rubin, Joshua B.
Publicado 2014

Brd4-bound enhancers drive cell-intrinsic sex differences in glioblastoma

por Kfoury, Najla, Qi, Zongtai, Prager, Briana C., Wilkinson, Michael N., Broestl, Lauren, Berrett, Kristopher C., Moudgil, Arnav, Sankararaman, Sumithra, Chen, Xuhua, Gertz, Jason, Rich, Jeremy N., Mitra, Robi D., Rubin, Joshua B.
Publicado 2021

Calling Cards: a customizable platform to longitudinally record protein-DNA interactions over time in cells and tissues

por Yen, Allen, Mateusiak, Chase, Sarafinovska, Simona, Gachechiladze, Mariam A., Guo, Juanru, Chen, Xuhua, Moudgil, Arnav, Cammack, Alexander J., Hoisington-Lopez, Jessica, Crosby, MariaLynn, Brent, Michael R., Mitra, Robi D., Dougherty, Joseph D.
Publicado 2023

From karyotypes to precision genomics in 9p deletion and duplication syndromes

por Sams, Eleanor I., Ng, Jeffrey K., Tate, Victoria, Claire Hou, Ying-Chen, Cao, Yang, Antonacci-Fulton, Lucinda, Belhassan, Khadija, Neidich, Julie, Mitra, Robi D., Cole, F. Sessions, Dickson, Patricia, Milbrandt, Jeffrey, Turner, Tychele N.
Publicado 2021

Quantification of rare allelic variants from pooled genomic DNA

por Druley, Todd E, Vallania, Francesco LM, Wegner, Daniel J, Varley, Katherine E, Knowles, Olivia L, Bonds, Jacqueline A, Robison, Sarah W, Doniger, Scott W, Hamvas, Aaron, Cole, F. Sessions, Fay, Justin C, Mitra, Robi D
Publicado 2009