Detection of differentially methylated regions from bisulfite-seq data by hidden Markov models incorporating genome-wide methylation level distributions

por Saito, Yutaka, Mituyama, Toutai
Publicado 2015

Bisulfighter: accurate detection of methylated cytosines and differentially methylated regions

por Saito, Yutaka, Tsuji, Junko, Mituyama, Toutai
Publicado 2014

Directed acyclic graph kernels for structural RNA analysis

por Sato, Kengo, Mituyama, Toutai, Asai, Kiyoshi, Sakakibara, Yasubumi
Publicado 2008

CentroidFold: a web server for RNA secondary structure prediction

por Sato, Kengo, Hamada, Michiaki, Asai, Kiyoshi, Mituyama, Toutai
Publicado 2009

Prediction of Conserved Precursors of miRNAs and Their Mature Forms by Integrating Position-Specific Structural Features

por Terai, Goro, Okida, Hiroaki, Asai, Kiyoshi, Mituyama, Toutai
Publicado 2012

Epigenetic silencing of V(D)J recombination is a major determinant for selective differentiation of mucosal-associated invariant t cells from induced pluripotent stem cells

por Saito, Yutaka, Sugimoto, Chie, Mituyama, Toutai, Wakao, Hiroshi
Publicado 2017

Predictions of RNA secondary structure by combining homologous sequence information

por Hamada, Michiaki, Sato, Kengo, Kiryu, Hisanori, Mituyama, Toutai, Asai, Kiyoshi
Publicado 2009

Discovery of short pseudogenes derived from messenger RNAs

por Terai, Goro, Yoshizawa, Aya, Okida, Hiroaki, Asai, Kiyoshi, Mituyama, Toutai
Publicado 2010

Software.ncrna.org: web servers for analyses of RNA sequences

por Asai, Kiyoshi, Kiryu, Hisanori, Hamada, Michiaki, Tabei, Yasuo, Sato, Kengo, Matsui, Hiroshi, Sakakibara, Yasubumi, Terai, Goro, Mituyama, Toutai
Publicado 2008

The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs

por Mituyama, Toutai, Yamada, Kouichirou, Hattori, Emi, Okida, Hiroaki, Ono, Yukiteru, Terai, Goro, Yoshizawa, Aya, Komori, Takashi, Asai, Kiyoshi
Publicado 2009

Methylome, transcriptome, and PPARγ cistrome analyses reveal two epigenetic transitions in fat cells

por Takada, Hitomi, Saito, Yutaka, Mituyama, Toutai, Wei, Zong, Yoshihara, Eiji, Jacinto, Sandra, Downes, Michael, Evans, Ronald M, Kida, Yasuyuki S
Publicado 2014