ISOLATE: a computational strategy for identifying the primary origin of cancers using high-throughput sequencing

por Quon, Gerald, Morris, Quaid
Publicado 2009

Fast integration of heterogeneous data sources for predicting gene function with limited annotation

por Mostafavi, Sara, Morris, Quaid
Publicado 2010

RBPmotif: a web server for the discovery of sequence and structure preferences of RNA-binding proteins

por Kazan, Hilal, Morris, Quaid
Publicado 2013

Computational purification of tumor gene expression data

por Deshwar, Amit, Quon, Gerald, Morris, Quaid
Publicado 2011

Labeling Nodes Using Three Degrees of Propagation

por Mostafavi, Sara, Goldenberg, Anna, Morris, Quaid
Publicado 2012

BayMiR: inferring evidence for endogenous miRNA-induced gene repression from mRNA expression profiles

por Radfar, Hossein, Wong, Willy, Morris, Quaid
Publicado 2013

Reconstructing cancer phylogenies using Pairtree, a clone tree reconstruction algorithm

por Kulman, Ethan, Wintersinger, Jeff, Morris, Quaid
Publicado 2022

PAN-cODE: COVID-19 forecasting using conditional latent ODEs

por Shi, Ruian, Zhang, Haoran, Morris, Quaid
Publicado 2022

Computational Prediction of Intronic microRNA Targets using Host Gene Expression Reveals Novel Regulatory Mechanisms

por Radfar, M. Hossein, Wong, Willy, Morris, Quaid
Publicado 2011

Regional mutational signature activities in cancer genomes

por Timmons, Caitlin, Morris, Quaid, Harrigan, Caitlin F.
Publicado 2022

Enhancer identification in mouse embryonic stem cells using integrative modeling of chromatin and genomic features

por Chen, Chih-yu, Morris, Quaid, Mitchell, Jennifer A
Publicado 2012

High-throughput characterization of protein–RNA interactions

por Cook, Kate B., Hughes, Timothy R., Morris, Quaid D.
Publicado 2015

QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq data

por Ha, Kevin C. H., Blencowe, Benjamin J., Morris, Quaid
Publicado 2018

TrackSigFreq: subclonal reconstructions based on mutation signatures and allele frequencies

por Harrigan, Caitlin F, Rubanova, Yulia, Morris, Quaid, Selega, Alina
Publicado 2020

Finding the target sites of RNA-binding proteins

por Li, Xiao, Kazan, Hilal, Lipshitz, Howard D, Morris, Quaid D
Publicado 2014

GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function

por Mostafavi, Sara, Ray, Debajyoti, Warde-Farley, David, Grouios, Chris, Morris, Quaid
Publicado 2008

RNAcontext: A New Method for Learning the Sequence and Structure Binding Preferences of RNA-Binding Proteins

por Kazan, Hilal, Ray, Debashish, Chan, Esther T., Hughes, Timothy R., Morris, Quaid
Publicado 2010

Detecting microRNAs of high influence on protein functional interaction networks: a prostate cancer case study

por Alshalalfa, Mohammed, Bader, Gary D, Goldenberg, Anna, Morris, Quaid, Alhajj, Reda
Publicado 2012

Identifying Cancer Specific Functionally Relevant miRNAs from Gene Expression and miRNA-to-Gene Networks Using Regularized Regression

por Mezlini, Aziz M., Wang, Bo, Deshwar, Amit, Morris, Quaid, Goldenberg, Anna
Publicado 2013

Inferring clonal evolution of tumors from single nucleotide somatic mutations

por Jiao, Wei, Vembu, Shankar, Deshwar, Amit G, Stein, Lincoln, Morris, Quaid
Publicado 2014