Obol: Integrating Language and Meaning in Bio-Ontologies

por Mungall, Christopher J.
Publicado 2004

Capturing phenotypes for precision medicine

por Robinson, Peter N., Mungall, Christopher J., Haendel, Melissa
Publicado 2015

Formalization of taxon-based constraints to detect inconsistencies in annotation and ontology development

por Deegan (née Clark), Jennifer I, Dimmer, Emily C, Mungall, Christopher J
Publicado 2010

FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability

por Vita, Randi, Overton, James A, Mungall, Christopher J, Sette, Alessandro, Peters, Bjoern
Publicado 2018

The environment ontology: contextualising biological and biomedical entities

por Buttigieg, Pier Luigi, Morrison, Norman, Smith, Barry, Mungall, Christopher J, Lewis, Suzanna E
Publicado 2013

Gene Set Summarization using Large Language Models

por Joachimiak, Marcin P., Caufield, J. Harry, Harris, Nomi L., Kim, Hyeongsik, Mungall, Christopher J.
Publicado 2023

AmiGO: online access to ontology and annotation data

por Carbon, Seth, Ireland, Amelia, Mungall, Christopher J., Shu, ShengQiang, Marshall, Brad, Lewis, Suzanna
Publicado 2009

On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report

por Thomas, Paul D., Wood, Valerie, Mungall, Christopher J., Lewis, Suzanna E., Blake, Judith A.
Publicado 2012

Uberon, an integrative multi-species anatomy ontology

por Mungall, Christopher J, Torniai, Carlo, Gkoutos, Georgios V, Lewis, Suzanna E, Haendel, Melissa A
Publicado 2012

A knowledge based approach to matching human neurodegenerative disease and animal models

por Maynard, Sarah M., Mungall, Christopher J., Lewis, Suzanna E., Imam, Fahim T., Martone, Maryann E.
Publicado 2013

The Sequence Ontology: a tool for the unification of genome annotations

por Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, Ashburner, Michael
Publicado 2005

Linking Human Diseases to Animal Models Using Ontology-Based Phenotype Annotation

por Washington, Nicole L., Haendel, Melissa A., Mungall, Christopher J., Ashburner, Michael, Westerfield, Monte, Lewis, Suzanna E.
Publicado 2009

On the limitations of large language models in clinical diagnosis

por Reese, Justin T, Danis, Daniel, Caulfied, J Harry, Casiraghi, Elena, Valentini, Giorgio, Mungall, Christopher J, Robinson, Peter N
Publicado 2023

Integrating phenotype ontologies across multiple species

por Mungall, Christopher J, Gkoutos, Georgios V, Smith, Cynthia L, Haendel, Melissa A, Lewis, Suzanna E, Ashburner, Michael
Publicado 2010

Modeling biochemical pathways in the gene ontology

por Hill, David P., D’Eustachio, Peter, Berardini, Tanya Z., Mungall, Christopher J., Renedo, Nikolai, Blake, Judith A.
Publicado 2016

The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation

por Buttigieg, Pier Luigi, Pafilis, Evangelos, Lewis, Suzanna E., Schildhauer, Mark P., Walls, Ramona L., Mungall, Christopher J.
Publicado 2016

ROBOT: A Tool for Automating Ontology Workflows

por Jackson, Rebecca C., Balhoff, James P., Douglass, Eric, Harris, Nomi L., Mungall, Christopher J., Overton, James A.
Publicado 2019

A Logical Model of Homology for Comparative Biology

por Mabee, Paula M, Balhoff, James P, Dahdul, Wasila M, Lapp, Hilmar, Mungall, Christopher J, Vision, Todd J
Publicado 2020

The Porifera Ontology (PORO): enhancing sponge systematics with an anatomy ontology

por Thacker, Robert W, Díaz, Maria Cristina, Kerner, Adeline, Vignes-Lebbe, Régine, Segerdell, Erik, Haendel, Melissa A, Mungall, Christopher J
Publicado 2014

Logical Development of the Cell Ontology

por Meehan, Terrence F, Masci, Anna Maria, Abdulla, Amina, Cowell, Lindsay G, Blake, Judith A, Mungall, Christopher J, Diehl, Alexander D
Publicado 2011