Precision long-read metagenomics sequencing for food safety by detection and assembly of Shiga toxin-producing Escherichia coli in irrigation water

por Maguire, Meghan, Kase, Julie A., Roberson, Dwayne, Muruvanda, Tim, Brown, Eric W., Allard, Marc, Musser, Steven M., González-Escalona, Narjol
Publicado 2021

Precision metagenomics sequencing for food safety: hybrid assembly of Shiga toxin-producing Escherichia coli in enriched agricultural water

por Maguire, Meghan, Ramachandran, Padmini, Tallent, Sandra, Mammel, Mark K., Brown, Eric W., Allard, Marc W., Musser, Steven M., González-Escalona, Narjol
Publicado 2023

The evolutionary history and diagnostic utility of the CRISPR-Cas system within Salmonella enterica ssp. enterica

por Pettengill, James B., Timme, Ruth E., Barrangou, Rodolphe, Toro, Magaly, Allard, Marc W., Strain, Errol, Musser, Steven M., Brown, Eric W.
Publicado 2014

High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

por Allard, Marc W, Luo, Yan, Strain, Errol, Li, Cong, Keys, Christine E, Son, Insook, Stones, Robert, Musser, Steven M, Brown, Eric W
Publicado 2012

Development of a targeted amplicon sequencing method for genotyping Cyclospora cayetanensis from fresh produce and clinical samples with enhanced genomic resolution and sensitivity

por Leonard, Susan R., Mammel, Mark K., Gharizadeh, Baback, Almeria, Sonia, Ma, Zhihai, Lipman, David J., Torrence, Mary E., Wang, Chunlin, Musser, Steven M.
Publicado 2023

Phylogenetic Diversity of the Enteric Pathogen Salmonella enterica subsp. enterica Inferred from Genome-Wide Reference-Free SNP Characters

por Timme, Ruth E., Pettengill, James B., Allard, Marc W., Strain, Errol, Barrangou, Rodolphe, Wehnes, Chris, Van Kessel, JoAnn S., Karns, Jeffrey S., Musser, Steven M., Brown, Eric W.
Publicado 2013

On the Evolutionary History, Population Genetics and Diversity among Isolates of Salmonella Enteritidis PFGE Pattern JEGX01.0004

por Allard, Marc W., Luo, Yan, Strain, Errol, Pettengill, James, Timme, Ruth, Wang, Charles, Li, Cong, Keys, Christine E., Zheng, Jie, Stones, Robert, Wilson, Mark R., Musser, Steven M., Brown, Eric W.
Publicado 2013

Survey of Salmonella in raw tree nuts at retail in the United States

por Zhang, Guodong, Hu, Lijun, Luo, Yan, Santillana Farakos, Sofia M, Johnson, Rhoma, Scott, Virginia N., Curry, Phillip, Melka, David, Brown, Eric W., Strain, Errol, Bunning, Vincent K., Musser, Steven M., Hammack, Thomas S.
Publicado 2021

Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992

por Allard, Marc W., Muruvanda, Tim, Strain, Errol, Timme, Ruth, Luo, Yan, Wang, Charles, Keys, Christine E., Payne, Justin, Cooper, Tony, Luong, Khai, Song, Yi, Chin, Chen-Shan, Korlach, Jonas, Roberts, Rich J., Evans, Peter, Musser, Steven M., Brown, Eric W.
Publicado 2013

Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992

por Allard, Marc W., Muruvanda, Tim, Strain, Errol, Timme, Ruth, Luo, Yan, Wang, Charles, Keys, Christine E., Payne, Justin, Cooper, Tony, Luong, Khai, Song, Yi, Chin, Chen-Shan, Korlach, Jonas, Roberts, Richard J., Evans, Peter, Musser, Steven M., Brown, Eric W.
Publicado 2014