Ten Years of Extracellular Matrix Proteomics: Accomplishments, Challenges, and Future Perspectives

por Naba, Alexandra
Publicado 2023

The liver matrisome – looking beyond collagens

por Arteel, Gavin E., Naba, Alexandra
Publicado 2020

Pan-Cancer Analysis of the Genomic Alterations and Mutations of the Matrisome

por Izzi, Valerio, Davis, Martin N., Naba, Alexandra
Publicado 2020

Enrichment of Extracellular Matrix Proteins from Tissues and Digestion into Peptides for Mass Spectrometry Analysis

por Naba, Alexandra, Clauser, Karl R., Hynes, Richard O.
Publicado 2015

In-silico definition of the Drosophila melanogaster matrisome

por Davis, Martin N., Horne-Badovinac, Sally, Naba, Alexandra
Publicado 2019

Matrisome AnalyzeR: A suite of tools to annotate and quantify ECM molecules in big datasets across organisms

por Petrov, Petar B., Considine, James M., Izzi, Valerio, Naba, Alexandra
Publicado 2023

Matrisome AnalyzeR – a suite of tools to annotate and quantify ECM molecules in big datasets across organisms

por Petrov, Petar B., Considine, James M., Izzi, Valerio, Naba, Alexandra
Publicado 2023

MatrisomeDB: the ECM-protein knowledge database

por Shao, Xinhao, Taha, Isra N, Clauser, Karl R, Gao, Yu (Tom), Naba, Alexandra
Publicado 2020

Extracellular matrix signatures of human mammary carcinoma identify novel metastasis promoters

por Naba, Alexandra, Clauser, Karl R, Lamar, John M, Carr, Steven A, Hynes, Richard O
Publicado 2014

Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression

por Naba, Alexandra, Clauser, Karl R., Mani, D. R., Carr, Steven A., Hynes, Richard O.
Publicado 2017

The Matrisome: In Silico Definition and In Vivo Characterization by Proteomics of Normal and Tumor Extracellular Matrices

por Naba, Alexandra, Clauser, Karl R., Hoersch, Sebastian, Liu, Hui, Carr, Steven A., Hynes, Richard O.
Publicado 2012

The Burden of Post-Translational Modification (PTM)—Disrupting Mutations in the Tumor Matrisome

por Holstein, Elisa, Dittmann, Annalena, Kääriäinen, Anni, Pesola, Vilma, Koivunen, Jarkko, Pihlajaniemi, Taina, Naba, Alexandra, Izzi, Valerio
Publicado 2021

Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver

por Naba, Alexandra, Clauser, Karl R, Whittaker, Charles A, Carr, Steven A, Tanabe, Kenneth K, Hynes, Richard O
Publicado 2014

MatrisomeDB 2.0: 2023 updates to the ECM-protein knowledge database

por Shao, Xinhao, Gomez, Clarissa D, Kapoor, Nandini, Considine, James M, Grams, Christopher, Gao, Yu (Tom), Naba, Alexandra
Publicado 2022

Ezrin regulates microvillus morphogenesis by promoting distinct activities of Eps8 proteins

por Zwaenepoel, Ingrid, Naba, Alexandra, Menezes Lyra Da Cunha, Marcel, Del Maestro, Laurence, Formstecher, Etienne, Louvard, Daniel, Arpin, Monique
Publicado 2012

The in-silico characterization of the Caenorhabditis elegans matrisome and proposal of a novel collagen classification

por Teuscher, Alina C., Jongsma, Elisabeth, Davis, Martin N., Statzer, Cyril, Gebauer, Jan M., Naba, Alexandra, Ewald, Collin Y.
Publicado 2019

Ezrin phosphorylation on tyrosine 477 regulates invasion and metastasis of breast cancer cells

por Mak, Hannah, Naba, Alexandra, Varma, Sonal, Schick, Colleen, Day, Andrew, SenGupta, Sandip K, Arpin, Monique, Elliott, Bruce E
Publicado 2012

MatrixDB: integration of new data with a focus on glycosaminoglycan interactions

por Clerc, Olivier, Deniaud, Madeline, Vallet, Sylvain D, Naba, Alexandra, Rivet, Alain, Perez, Serge, Thierry-Mieg, Nicolas, Ricard-Blum, Sylvie
Publicado 2019

A tumor-derived type III collagen-rich ECM niche regulates tumor cell dormancy

por Di Martino, Julie S., Nobre, Ana Rita, Mondal, Chandrani, Taha, Isra, Farias, Eduardo F., Fertig, Elana J., Naba, Alexandra, Aguirre-Ghiso, Julio A., Bravo-Cordero, Jose Javier
Publicado 2022

The matrix in focus: new directions in extracellular matrix research from the 2021 ASMB hybrid meeting

por Nerger, Bryan A., Jones, Tia M., Rose, Keron W. J., Barqué, Anna, Weinbaum, Justin S., Petrie, Ryan J., Chang, Joan, Vanhoutte, Davy, LaDuca, Kendra, Hubmacher, Dirk, Naba, Alexandra
Publicado 2022