In vitro modeling of hepatocellular carcinoma molecular subtypes for anti-cancer drug assessment

por Hirschfield, Hadassa, Bian, C Billie, Higashi, Takaaki, Nakagawa, Shigeki, Zeleke, Tizita Z, Nair, Venugopalan D, Fuchs, Bryan C, Hoshida, Yujin
Publicado 2018

Earlier detection of SARS‐CoV‐2 infection by blood RNA signature microfluidics assay

por Cappuccio, Antonio, Geis, Jennifer, Ge, Yongchao, Nair, Venugopalan D., Ramalingam, Naveen, Mao, Weiguang, Chikina, Maria, Letizia, Andrew G., Sealfon, Stuart C.
Publicado 2022

Optimization of the Omni-ATAC protocol to chromatin accessibility profiling in snap-frozen rat adipose and muscle tissues

por Nair, Venugopalan D., Vasoya, Mital, Nair, Vishnu, Smith, Gregory R., Pincas, Hanna, Ge, Yongchao, Douglas, Collin M., Esser, Karyn A., Sealfon, Stuart C.
Publicado 2022

Multi-omics profiling of single nuclei from frozen archived postmortem human pituitary tissue

por Mendelev, Natalia, Zamojski, Michel, Amper, Mary Anne S., Cheng, Wan Sze, Pincas, Hanna, Nair, Venugopalan D., Zaslavsky, Elena, Sealfon, Stuart C., Ruf-Zamojski, Frederique
Publicado 2022

Sedentary and Trained Older Men Have Distinct Circulating Exosomal microRNA Profiles at Baseline and in Response to Acute Exercise

por Nair, Venugopalan D., Ge, Yongchao, Li, Side, Pincas, Hanna, Jain, Nimisha, Seenarine, Nitish, Amper, Mary Anne S., Goodpaster, Bret H., Walsh, Martin J., Coen, Paul M., Sealfon, Stuart C.
Publicado 2020

Transcriptome signatures preceding the induction of anti-stalk antibodies elicited after universal influenza vaccination

por Aydillo, Teresa, Gonzalez-Reiche, Ana S., Stadlbauer, Daniel, Amper, Mary Anne, Nair, Venugopalan D., Mariottini, Chiara, Sealfon, Stuart C., van Bakel, Harm, Palese, Peter, Krammer, Florian, García-Sastre, Adolfo
Publicado 2022

Rehabilitative Impact of Exercise Training on Human Skeletal Muscle Transcriptional Programs in Parkinson’s Disease

por Lavin, Kaleen M., Ge, Yongchao, Sealfon, Stuart C., Nair, Venugopalan D., Wilk, Katarzyna, McAdam, Jeremy S., Windham, Samuel T., Kumar, Preeti Lakshman, McDonald, Merry-Lynn N., Bamman, Marcas M.
Publicado 2020

Localization of BRCA1 protein in breast cancer tissue and cell lines with mutations

por Tulchin, Natalie, Ornstein, Leonard, Dikman, Steven, Strauchen, James, Jaffer, Shabnam, Nagi, Chandandeep, Bleiweiss, Ira, Kornreich, Ruth, Edelmann, Lisa, Brown, Karen, Bodian, Carol, Nair, Venugopalan D, Chambon, Monique, Woods, Nicholas T, Monteiro, Alvaro NA
Publicado 2013

Single-cell transcriptional profiles in human skeletal muscle

por Rubenstein, Aliza B., Smith, Gregory R., Raue, Ulrika, Begue, Gwénaëlle, Minchev, Kiril, Ruf-Zamojski, Frederique, Nair, Venugopalan D., Wang, Xingyu, Zhou, Lan, Zaslavsky, Elena, Trappe, Todd A., Trappe, Scott, Sealfon, Stuart C.
Publicado 2020

Integrated single-cell multiome analysis reveals muscle fiber-type gene regulatory circuitry modulated by endurance exercise

por Rubenstein, Aliza B., Smith, Gregory R., Zhang, Zidong, Chen, Xi, Chambers, Toby L., Ruf-Zamojski, Frederique, Mendelev, Natalia, Cheng, Wan Sze, Zamojski, Michel, Amper, Mary Anne S., Nair, Venugopalan D., Marderstein, Andrew R., Montgomery, Stephen B., Troyanskaya, Olga G., Zaslavsky, Elena, Trappe, Todd, Trappe, Scott, Sealfon, Stuart C.
Publicado 2023

Single nucleus transcriptome and chromatin accessibility of postmortem human pituitaries reveal diverse stem cell regulatory mechanisms

por Zhang, Zidong, Zamojski, Michel, Smith, Gregory R., Willis, Thea L., Yianni, Val, Mendelev, Natalia, Pincas, Hanna, Seenarine, Nitish, Amper, Mary Anne S., Vasoya, Mital, Cheng, Wan Sze, Zaslavsky, Elena, Nair, Venugopalan D., Turgeon, Judith L., Bernard, Daniel J., Troyanskaya, Olga G., Andoniadou, Cynthia L., Sealfon, Stuart C., Ruf-Zamojski, Frederique
Publicado 2022

Multi-omic identification of key transcriptional regulatory programs during endurance exercise training

por Smith, Gregory R., Zhao, Bingqing, Lindholm, Malene E., Raja, Archana, Viggars, Mark, Pincas, Hanna, Gay, Nicole R., Sun, Yifei, Ge, Yongchao, Nair, Venugopalan D., Sanford, James A., Amper, Mary Anne S., Vasoya, Mital, Smith, Kevin S., Montgomery, Stephen, Zaslavsky, Elena, Bodine, Sue C., Esser, Karyn A., Walsh, Martin J., Snyder, Michael P.
Publicado 2023

Innate Immune Response to Influenza Virus at Single-Cell Resolution in Human Epithelial Cells Revealed Paracrine Induction of Interferon Lambda 1

por Ramos, Irene, Smith, Gregory, Ruf-Zamojski, Frederique, Martínez-Romero, Carles, Fribourg, Miguel, Carbajal, Edwin A., Hartmann, Boris M., Nair, Venugopalan D., Marjanovic, Nada, Monteagudo, Paula L., DeJesus, Veronica A., Mutetwa, Tinaye, Zamojski, Michel, Tan, Gene S., Jayaprakash, Ciriyam, Zaslavsky, Elena, Albrecht, Randy A., Sealfon, Stuart C., García-Sastre, Adolfo, Fernandez-Sesma, Ana
Publicado 2019

OR01-06 Single Nucleus Multi-omics Analysis Identifies Cellular Trajectories And Dynamic Changes In Gene Expression And Chromatin Accessibility In The Pituitary During The Mouse Es...

por Ruf-Zamojski, Frederique Murielle, Cheng, Wan Sze, Zhang, Zidong, Zamojski, Michel, Smith, Gregory R, Chen, Xi, Mendelev, Natalia, Strupinsky, Galia, Alonso, Carlos Agustín, Gambino, Luisina Ongaro, Zhou, Xiang, Brule, Emilie, Amper, Mary Anne S, Hanna, Pincas, Nair, Venugopalan D, Andoniadou, Cynthia Lilian, Turgeon, Judith L, Troyanskaya, Olga, Zaslavsky, Elena, Bernard, Daniel J, Sealfon, Stuart C
Publicado 2023

Single Nucleus Transcriptome and Chromatin Accessibility Landscapes of Human Pituitaries

por Ruf-Zamojski, Frederique Murielle, Zhang, Zidong, Zamojski, Michel, Smith, Gregory R, Yianni, Val, Willis, Thea L, Mendelev, Natalia, Pincas, Hanna, Seenarine, Nitish, Amper, Mary Anne S, Vasoya, Mital, Zhou, Xiang, Gambino, Luisina Ongaro, Schang, Gauthier, Mofsowitz, Sagie, Nair, Venugopalan D, Welt, Corrine Kolka, Troyanskaya, Olga G, Turgeon, Judith L, Bernard, Daniel J, Andoniadou, Cynthia Lilian, Sealfon, Stuart C
Publicado 2021

Asymptomatic SARS-CoV-2 Infection Is Associated With Higher Levels of Serum IL-17C, Matrix Metalloproteinase 10 and Fibroblast Growth Factors Than Mild Symptomatic COVID-19

por Soares-Schanoski, Alessandra, Sauerwald, Natalie, Goforth, Carl W., Periasamy, Sivakumar, Weir, Dawn L., Lizewski, Stephen, Lizewski, Rhonda, Ge, Yongchao, Kuzmina, Natalia A., Nair, Venugopalan D., Vangeti, Sindhu, Marjanovic, Nada, Cappuccio, Antonio, Cheng, Wan Sze, Mofsowitz, Sagie, Miller, Clare M., Yu, Xuechen B., George, Mary-Catherine, Zaslavsky, Elena, Bukreyev, Alexander, Troyanskaya, Olga G., Sealfon, Stuart C., Letizia, Andrew G., Ramos, Irene
Publicado 2022

Blood RNA alternative splicing events as diagnostic biomarkers for infectious disease

por Zhang, Zijun, Sauerwald, Natalie, Cappuccio, Antonio, Ramos, Irene, Nair, Venugopalan D., Nudelman, German, Zaslavsky, Elena, Ge, Yongchao, Gaitas, Angelo, Ren, Hui, Brockman, Joel, Geis, Jennifer, Ramalingam, Naveen, King, David, McClain, Micah T., Woods, Christopher W., Henao, Ricardo, Burke, Thomas W., Tsalik, Ephraim L., Goforth, Carl W., Lizewski, Rhonda A., Lizewski, Stephen E., Weir, Dawn L., Letizia, Andrew G., Sealfon, Stuart C., Troyanskaya, Olga G.
Publicado 2023

A methylation clock model of mild SARS‐CoV‐2 infection provides insight into immune dysregulation

por Mao, Weiguang, Miller, Clare M, Nair, Venugopalan D, Ge, Yongchao, Amper, Mary Anne S, Cappuccio, Antonio, George, Mary‐Catherine, Goforth, Carl W, Guevara, Kristy, Marjanovic, Nada, Nudelman, German, Pincas, Hanna, Ramos, Irene, Sealfon, Rachel S G, Soares‐Schanoski, Alessandra, Vangeti, Sindhu, Vasoya, Mital, Weir, Dawn L, Zaslavsky, Elena, Kim‐Schulze, Seunghee, Gnjatic, Sacha, Merad, Miriam, Letizia, Andrew G, Troyanskaya, Olga G, Sealfon, Stuart C, Chikina, Maria
Publicado 2023

Single nucleus multi-omics regulatory landscape of the murine pituitary

por Ruf-Zamojski, Frederique, Zhang, Zidong, Zamojski, Michel, Smith, Gregory R., Mendelev, Natalia, Liu, Hanqing, Nudelman, German, Moriwaki, Mika, Pincas, Hanna, Castanon, Rosa Gomez, Nair, Venugopalan D., Seenarine, Nitish, Amper, Mary Anne S., Zhou, Xiang, Ongaro, Luisina, Toufaily, Chirine, Schang, Gauthier, Nery, Joseph R., Bartlett, Anna, Aldridge, Andrew, Jain, Nimisha, Childs, Gwen V., Troyanskaya, Olga G., Ecker, Joseph R., Turgeon, Judith L., Welt, Corrine K., Bernard, Daniel J., Sealfon, Stuart C.
Publicado 2021

Antibody Responses to SARS-CoV-2 Following an Outbreak Among Marine Recruits With Asymptomatic or Mild Infection

por Ramos, Irene, Goforth, Carl, Soares-Schanoski, Alessandra, Weir, Dawn L., Samuels, Emily C., Phogat, Shreshta, Meyer, Michelle, Huang, Kai, Pietzsch, Colette A., Ge, Yongchao, Pike, Brian L., Regeimbal, James, Simons, Mark P., Termini, Michael S., Vangeti, Sindhu, Marjanovic, Nada, Lizewski, Stephen, Lizewski, Rhonda, George, Mary-Catherine, Nair, Venugopalan D., Smith, Gregory R., Mao, Weiguang, Chikina, Maria, Broder, Christopher C., Laing, Eric D., Bukreyev, Alexander, Sealfon, Stuart C., Letizia, Andrew G.
Publicado 2021