HiC-Hiker: a probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C

por Nakabayashi, Ryo, Morishita, Shinichi
Publicado 2020

The Origin and Evolution of Plant Flavonoid Metabolism

por Yonekura-Sakakibara, Keiko, Higashi, Yasuhiro, Nakabayashi, Ryo
Publicado 2019

Keeping the shape of plant tissue for visualizing metabolite features in segmentation and correlation analysis of imaging mass spectrometry in Asparagus officinalis

por Nakabayashi, Ryo, Hashimoto, Kei, Toyooka, Kiminori, Saito, Kazuki
Publicado 2019

Boosting Sensitivity in Liquid Chromatography–Fourier Transform Ion Cyclotron Resonance–Tandem Mass Spectrometry for Product Ion Analysis of Monoterpene Indole Alkaloids

por Nakabayashi, Ryo, Tsugawa, Hiroshi, Kitajima, Mariko, Takayama, Hiromitsu, Saito, Kazuki
Publicado 2015

Transgenic rice seed expressing flavonoid biosynthetic genes accumulate glycosylated and/or acylated flavonoids in protein bodies

por Ogo, Yuko, Mori, Tetsuya, Nakabayashi, Ryo, Saito, Kazuki, Takaiwa, Fumio
Publicado 2016

Changes in Primary and Secondary Metabolite Levels in Response to Gene Targeting-Mediated Site-Directed Mutagenesis of the Anthranilate Synthase Gene in Rice

por Saika, Hiroaki, Oikawa, Akira, Nakabayashi, Ryo, Matsuda, Fumio, Saito, Kazuki, Toki, Seiichi
Publicado 2012

UGT79B31 is responsible for the final modification step of pollen-specific flavonoid biosynthesis in Petunia hybrida

por Knoch, Eva, Sugawara, Satoko, Mori, Tetsuya, Nakabayashi, Ryo, Saito, Kazuki, Yonekura-Sakakibara, Keiko
Publicado 2017

Mass Spectra-Based Framework for Automated Structural Elucidation of Metabolome Data to Explore Phytochemical Diversity

por Matsuda, Fumio, Nakabayashi, Ryo, Sawada, Yuji, Suzuki, Makoto, Hirai, Masami Y., Kanaya, Shigehiko, Saito, Kazuki
Publicado 2011

Toward better annotation in plant metabolomics: isolation and structure elucidation of 36 specialized metabolites from Oryza sativa (rice) by using MS/MS and NMR analyses

por Yang, Zhigang, Nakabayashi, Ryo, Okazaki, Yozo, Mori, Tetsuya, Takamatsu, Satoshi, Kitanaka, Susumu, Kikuchi, Jun, Saito, Kazuki
Publicado 2013

Metabolic Profiling of Developing Pear Fruits Reveals Dynamic Variation in Primary and Secondary Metabolites, Including Plant Hormones

por Oikawa, Akira, Otsuka, Takao, Nakabayashi, Ryo, Jikumaru, Yusuke, Isuzugawa, Kanji, Murayama, Hideki, Saito, Kazuki, Shiratake, Katsuhiro
Publicado 2015

Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana

por Fukushima, Atsushi, Iwasa, Mami, Nakabayashi, Ryo, Kobayashi, Makoto, Nishizawa, Tomoko, Okazaki, Yozo, Saito, Kazuki, Kusano, Miyako
Publicado 2017

Metabolomic Evaluation of the Quality of Leaf Lettuce Grown in Practical Plant Factory to Capture Metabolite Signature

por Tamura, Yoshio, Mori, Tetsuya, Nakabayashi, Ryo, Kobayashi, Makoto, Saito, Kazuki, Okazaki, Seiichi, Wang, Ning, Kusano, Miyako
Publicado 2018

Metabolome-genome-wide association study dissects genetic architecture for generating natural variation in rice secondary metabolism

por Matsuda, Fumio, Nakabayashi, Ryo, Yang, Zhigang, Okazaki, Yozo, Yonemaru, Jun-ichi, Ebana, Kaworu, Yano, Masahiro, Saito, Kazuki
Publicado 2015

Function of AP2/ERF Transcription Factors Involved in the Regulation of Specialized Metabolism in Ophiorrhiza pumila Revealed by Transcriptomics and Metabolomics

por Udomsom, Nirin, Rai, Amit, Suzuki, Hideyuki, Okuyama, Jun, Imai, Ryosuke, Mori, Tetsuya, Nakabayashi, Ryo, Saito, Kazuki, Yamazaki, Mami
Publicado 2016

Multiomics-based characterization of specialized metabolites biosynthesis in Cornus Officinalis

por Rai, Amit, Rai, Megha, Kamochi, Hidetaka, Mori, Tetsuya, Nakabayashi, Ryo, Nakamura, Michimi, Suzuki, Hideyuki, Saito, Kazuki, Yamazaki, Mami
Publicado 2020

Gene-Metabolite Network Analysis Revealed Tissue-Specific Accumulation of Therapeutic Metabolites in Mallotus japonicus

por Rai, Megha, Rai, Amit, Mori, Tetsuya, Nakabayashi, Ryo, Yamamoto, Manami, Nakamura, Michimi, Suzuki, Hideyuki, Saito, Kazuki, Yamazaki, Mami
Publicado 2021

A flavonoid 3-O-glucoside:2″-O-glucosyltransferase responsible for terminal modification of pollen-specific flavonols in Arabidopsis thaliana

por Yonekura-Sakakibara, Keiko, Nakabayashi, Ryo, Sugawara, Satoko, Tohge, Takayuki, Ito, Takuya, Koyanagi, Misuzu, Kitajima, Mariko, Takayama, Hiromitsu, Saito, Kazuki
Publicado 2014

Seed-coat protective neolignans are produced by the dirigent protein AtDP1 and the laccase AtLAC5 in Arabidopsis

por Yonekura-Sakakibara, Keiko, Yamamura, Masaomi, Matsuda, Fumio, Ono, Eiichiro, Nakabayashi, Ryo, Sugawara, Satoko, Mori, Tetsuya, Tobimatsu, Yuki, Umezawa, Toshiaki, Saito, Kazuki
Publicado 2020

Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae

por Tohge, Takayuki, Wendenburg, Regina, Ishihara, Hirofumi, Nakabayashi, Ryo, Watanabe, Mutsumi, Sulpice, Ronan, Hoefgen, Rainer, Takayama, Hiromitsu, Saito, Kazuki, Stitt, Mark, Fernie, Alisdair R.
Publicado 2016

Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana

por Yonekura-Sakakibara, Keiko, Fukushima, Atsushi, Nakabayashi, Ryo, Hanada, Kousuke, Matsuda, Fumio, Sugawara, Satoko, Inoue, Eri, Kuromori, Takashi, Ito, Takuya, Shinozaki, Kazuo, Wangwattana, Bunyapa, Yamazaki, Mami, Saito, Kazuki
Publicado 2012