MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies

por Robertson, James, Nash, John H. E.
Publicado 2018

Draft Whole-Genome Sequence of Morganella morganii Serotype O:1ab

por Nash, John H. E., Young, N. Martin
Publicado 2015

Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance

por Robertson, James, Bessonov, Kyrylo, Schonfeld, Justin, Nash, John H. E.
Publicado 2020

A global survey of Salmonella plasmids and their associations with antimicrobial resistance

por Robertson, James, Schonfeld, Justin, Bessonov, Kyrylo, Bastedo, Patrick, Nash, John H. E.
Publicado 2023

Completed Genome Sequences of Strains from 36 Serotypes of Salmonella

por Robertson, James, Yoshida, Catherine, Gurnik, Simone, Rankin, Marisa, Nash, John H. E.
Publicado 2018

Correction for Robertson et al., “Completed Genome Sequences of Strains from 36 Serotypes of Salmonella”

por Robertson, James, Yoshida, Catherine, Gurnik, Simone, Rankin, Marisa, Nash, John H. E.
Publicado 2018

Complete Genome and Plasmid Sequences of Three Canadian Strains of Salmonella enterica subsp. enterica Serovar Enteritidis Belonging to Phage Types 8, 13, and 13a

por Rehman, Muhammad Attiq, Labbé, Geneviève, Ziebell, Kim, Johnson, Roger P., Nash, John H. E.
Publicado 2015

Modulation of Gene Expression in Actinobacillus pleuropneumoniae Exposed to Bronchoalveolar Fluid

por Lone, Abdul G., Deslandes, Vincent, Nash, John H. E., Jacques, Mario, MacInnes, Janet I.
Publicado 2009

Development of a multi-locus typing scheme for an Enterobacteriaceae linear plasmid that mediates inter-species transfer of flagella

por Robertson, James, Lin, Janet, Wren-Hedgus, Amie, Arya, Gitanjali, Carrillo, Catherine, Nash, John H. E.
Publicado 2019

Evaluation of five commercial DNA extraction kits using Salmonella as a model for implementation of rapid Nanopore sequencing in routine diagnostic laboratories

por Eagle, Shannon H. C., Robertson, James, Bastedo, D. Patrick, Liu, Kira, Nash, John H. E.
Publicado 2023

Four Escherichia coli O157:H7 Phages: A New Bacteriophage Genus and Taxonomic Classification of T1-Like Phages

por Niu, Yan D., McAllister, Tim A., Nash, John H. E., Kropinski, Andrew M., Stanford, Kim
Publicado 2014

Effects of growth conditions on biofilm formation by Actinobacillus pleuropneumoniae

por Labrie, Josée, Pelletier-Jacques, Geneviève, Deslandes, Vincent, Ramjeet, Mahendrasingh, Auger, Eliane, Nash, John H.E., Jacques, Mario
Publicado 2010

Draft Genome Assembly of a Potentially Zoonotic Cryptosporidium parvum Isolate, UKP1

por Nash, John H. E., Robertson, James, Elwin, Kristin, Chalmers, Rachel A., Kropinski, Andrew M., Guy, Rebecca A.
Publicado 2018

Complete Genome and Plasmid Sequences of 32 Salmonella enterica Strains from 30 Serovars

por Bessonov, Kyrylo, Robertson, James A., Lin, Janet T., Liu, Kira, Gurnik, Simone, Kernaghan, Shaun A., Yoshida, Catherine, Nash, John H. E.
Publicado 2018

Complete Genome and Plasmid Sequences of Three Canadian Isolates of Salmonella enterica subsp. enterica Serovar Heidelberg from Human and Food Sources

por Labbé, Geneviève, Edirmanasinghe, Romaine, Ziebell, Kim, Nash, John H. E., Bekal, Sadjia, Parmley, E. Jane, Mulvey, Michael R., Johnson, Roger P.
Publicado 2016

The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies

por Yoshida, Catherine E., Kruczkiewicz, Peter, Laing, Chad R., Lingohr, Erika J., Gannon, Victor P. J., Nash, John H. E., Taboada, Eduardo N.
Publicado 2016

An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing

por Robertson, James, Yoshida, Catherine, Gurnik, Simone, McGrogan, Madison, Davis, Kristin, Arya, Gitanjali, Murphy, Stephanie A., Nichani, Anil, Nash, John H. E.
Publicado 2018

The Sequence of Two Bacteriophages with Hypermodified Bases Reveals Novel Phage-Host Interactions

por Kropinski, Andrew M., Turner, Dann, Nash, John H. E., Ackermann, Hans-Wolfgang, Lingohr, Erika J., Warren, Richard A., Ehrlich, Kenneth C., Ehrlich, Melanie
Publicado 2018

ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data

por Bessonov, Kyrylo, Laing, Chad, Robertson, James, Yong, Irene, Ziebell, Kim, Gannon, Victor P. J., Nichani, Anil, Arya, Gitanjali, Nash, John H. E., Christianson, Sara
Publicado 2021

The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory

por Yachison, Chris A., Yoshida, Catherine, Robertson, James, Nash, John H. E., Kruczkiewicz, Peter, Taboada, Eduardo N., Walker, Matthew, Reimer, Aleisha, Christianson, Sara, Nichani, Anil, Nadon, Celine
Publicado 2017