TENET: gene network reconstruction using transfer entropy reveals key regulatory factors from single cell transcriptomic data

por Kim, Junil, T. Jakobsen, Simon, Natarajan, Kedar N, Won, Kyoung-Jae
Publicado 2020

SC3 - consensus clustering of single-cell RNA-Seq data

por Kiselev, Vladimir Yu., Kirschner, Kristina, Schaub, Michael T., Andrews, Tallulah, Yiu, Andrew, Chandra, Tamir, Natarajan, Kedar N, Reik, Wolf, Barahona, Mauricio, Green, Anthony R, Hemberg, Martin
Publicado 2017

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

por Kolodziejczyk, Aleksandra A., Kim, Jong Kyoung, Tsang, Jason C.H., Ilicic, Tomislav, Henriksson, Johan, Natarajan, Kedar N., Tuck, Alex C., Gao, Xuefei, Bühler, Marc, Liu, Pentao, Marioni, John C., Teichmann, Sarah A.
Publicado 2015

The systems biology format converter

por Rodriguez, Nicolas, Pettit, Jean-Baptiste, Dalle Pezze, Piero, Li, Lu, Henry, Arnaud, van Iersel, Martijn P., Jalowicki, Gael, Kutmon, Martina, Natarajan, Kedar N., Tolnay, David, Stefan, Melanie I., Evelo, Chris T., Le Novère, Nicolas
Publicado 2016

CRISPR-Cas12a-integrated transgenes in genomic safe harbors retain high expression in human hematopoietic iPSC-derived lineages and primary cells

por Vlassis, Arsenios, Jensen, Tanja L., Mohr, Marina, Jedrzejczyk, Dominika J., Meng, Xiangyou, Kovacs, Gergo, Morera-Gómez, Martí, Barghetti, Andrea, Muyo Abad, Sergi, Baumgartner, Roland F., Natarajan, Kedar N., Nielsen, Lars K., Warnecke, Tanya, Gill, Ryan T.
Publicado 2023

Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition

por Oatley, Morgan, Bölükbası, Özge Vargel, Svensson, Valentine, Shvartsman, Maya, Ganter, Kerstin, Zirngibl, Katharina, Pavlovich, Polina V., Milchevskaya, Vladislava, Foteva, Vladimira, Natarajan, Kedar N., Baying, Bianka, Benes, Vladimir, Patil, Kiran R., Teichmann, Sarah A., Lancrin, Christophe
Publicado 2020

Exploration of cell state heterogeneity using single-cell proteomics through sensitivity-tailored data-independent acquisition

por Petrosius, Valdemaras, Aragon-Fernandez, Pedro, Üresin, Nil, Kovacs, Gergo, Phlairaharn, Teeradon, Furtwängler, Benjamin, Op De Beeck, Jeff, Skovbakke, Sarah L., Goletz, Steffen, Thomsen, Simon Francis, Keller, Ulrich auf dem, Natarajan, Kedar N., Porse, Bo T., Schoof, Erwin M.
Publicado 2023

Transcriptional Dynamics of Hepatic Sinusoid‐Associated Cells After Liver Injury

por Terkelsen, Mike K., Bendixen, Sofie M., Hansen, Daniel, Scott, Emma A.H., Moeller, Andreas F., Nielsen, Ronni, Mandrup, Susanne, Schlosser, Anders, Andersen, Thomas L., Sorensen, Grith L., Krag, Aleksander, Natarajan, Kedar N., Detlefsen, Sönke, Dimke, Henrik, Ravnskjaer, Kim
Publicado 2020