OligoRAP – an Oligo Re-Annotation Pipeline to improve annotation and estimate target specificity

por Neerincx, Pieter BT, Rauwerda, Han, Nie, Haisheng, Groenen, Martien AM, Breit, Timo M, Leunissen, Jack AM
Publicado 2009

Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis

por Neerincx, Pieter BT, Casel, Pierrot, Prickett, Dennis, Nie, Haisheng, Watson, Michael, Leunissen, Jack AM, Groenen, Martien AM, Klopp, Christophe
Publicado 2009

Microarray data mining using Bioconductor packages

por Nie, Haisheng, Neerincx, Pieter BT, Poel, Jan van der, Ferrari, Francesco, Bicciato, Silvio, Leunissen, Jack AM, Groenen, Martien AM
Publicado 2009

Using R in Taverna: RShell v1.2

por Wassink, Ingo, Rauwerda, Han, Neerincx, Pieter BT, Vet, Paul E van der, Breit, Timo M, Leunissen, Jack AM, Nijholt, Anton
Publicado 2009

Gene Expression in Chicken Reveals Correlation with Structural Genomic Features and Conserved Patterns of Transcription in the Terrestrial Vertebrates

por Nie, Haisheng, Crooijmans, Richard P. M. A., Lammers, Aart, van Schothorst, Evert M., Keijer, Jaap, Neerincx, Pieter B. T., Leunissen, Jack A. M., Megens, Hendrik-Jan, Groenen, Martien A. M.
Publicado 2010

Ten quick tips for building FAIR workflows

por de Visser, Casper, Johansson, Lennart F., Kulkarni, Purva, Mei, Hailiang, Neerincx, Pieter, Joeri van der Velde, K., Horvatovich, Péter, van Gool, Alain J., Swertz, Morris A., Hoen, Peter A. C. ‘t, Niehues, Anna
Publicado 2023

Running‐wheel activity delays mitochondrial respiratory flux decline in aging mouse muscle via a post‐transcriptional mechanism

por Stolle, Sarah, Ciapaite, Jolita, Reijne, Aaffien C., Talarovicova, Alzbeta, Wolters, Justina C., Aguirre‐Gamboa, Raúl, van der Vlies, Pieter, de Lange, Kim, Neerincx, Pieter B., van der Vries, Gerben, Deelen, Patrick, Swertz, Morris A., Li, Yang, Bischoff, Rainer, Permentier, Hjalmar P., Horvatovitch, Peter L., Groen, Albert K., van Dijk, Gertjan, Reijngoud, Dirk‐Jan, Bakker, Barbara M.
Publicado 2017

Methods for interpreting lists of affected genes obtained in a DNA microarray experiment

por Hedegaard, Jakob, Arce, Cristina, Bicciato, Silvio, Bonnet, Agnès, Buitenhuis, Bart, Collado-Romero, Melania, Conley, Lene N, SanCristobal, Magali, Ferrari, Francesco, Garrido, Juan J, Groenen, Martien AM, Hornshøj, Henrik, Hulsegge, Ina, Jiang, Li, Jiménez-Marín, Ángeles, Kommadath, Arun, Lagarrigue, Sandrine, Leunissen, Jack AM, Liaubet, Laurence, Neerincx, Pieter BT, Nie, Haisheng, Poel, Jan van der, Prickett, Dennis, Ramirez-Boo, María, Rebel, Johanna MJ, Robert-Granié, Christèle, Skarman, Axel, Smits, Mari A, Sørensen, Peter, Tosser-Klopp, Gwenola, Watson, Michael
Publicado 2009

The Genome of the Netherlands: design, and project goals

por Boomsma, Dorret I, Wijmenga, Cisca, Slagboom, Eline P, Swertz, Morris A, Karssen, Lennart C, Abdellaoui, Abdel, Ye, Kai, Guryev, Victor, Vermaat, Martijn, van Dijk, Freerk, Francioli, Laurent C, Hottenga, Jouke Jan, Laros, Jeroen F J, Li, Qibin, Li, Yingrui, Cao, Hongzhi, Chen, Ruoyan, Du, Yuanping, Li, Ning, Cao, Sujie, van Setten, Jessica, Menelaou, Androniki, Pulit, Sara L, Hehir-Kwa, Jayne Y, Beekman, Marian, Elbers, Clara C, Byelas, Heorhiy, de Craen, Anton J M, Deelen, Patrick, Dijkstra, Martijn, den Dunnen, Johan T, de Knijff, Peter, Houwing-Duistermaat, Jeanine, Koval, Vyacheslav, Estrada, Karol, Hofman, Albert, Kanterakis, Alexandros, Enckevort, David van, Mai, Hailiang, Kattenberg, Mathijs, van Leeuwen, Elisabeth M, Neerincx, Pieter B T, Oostra, Ben, Rivadeneira, Fernanodo, Suchiman, Eka H D, Uitterlinden, Andre G, Willemsen, Gonneke, Wolffenbuttel, Bruce H, Wang, Jun, de Bakker, Paul I W, van Ommen, Gert-Jan, van Duijn, Cornelia M
Publicado 2014