Implications of reducing antibiotic treatment duration for antimicrobial resistance in hospital settings: A modelling study and meta-analysis

por Mo, Yin, Oonsivilai, Mathupanee, Lim, Cherry, Niehus, Rene, Cooper, Ben S.
Publicado 2023

Migration and horizontal gene transfer divide microbial genomes into multiple niches

por Niehus, Rene, Mitri, Sara, Fletcher, Alexander G., Foster, Kevin R.
Publicado 2015

Quantifying bias of COVID-19 prevalence and severity estimates in Wuhan, China that depend on reported cases in international travelers

por Niehus, Rene, De Salazar, Pablo M., Taylor, Aimee R., Lipsitch, Marc
Publicado 2020

Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China

por Niehus, Rene, De Salazar, Pablo M, Taylor, Aimee R, Lipsitch, Marc
Publicado 2020

The evolution of strategy in bacterial warfare via the regulation of bacteriocins and antibiotics

por Niehus, Rene, Oliveira, Nuno M, Li, Aming, Fletcher, Alexander G, Foster, Kevin R
Publicado 2021

Identifying Locations with Possible Undetected Imported Severe Acute Respiratory Syndrome Coronavirus 2 Cases by Using Importation Predictions

por De Salazar, Pablo Martinez, Niehus, René, Taylor, Aimee, Buckee, Caroline O’Flaherty, Lipsitch, Marc
Publicado 2020

Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China

por Wu, Joseph T., Leung, Kathy, Bushman, Mary, Kishore, Nishant, Niehus, Rene, de Salazar, Pablo M., Cowling, Benjamin J., Lipsitch, Marc, Leung, Gabriel M.
Publicado 2020

Addendum: Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China

por Wu, Joseph T., Leung, Kathy, Bushman, Mary, Kishore, Nishant, Niehus, Rene, de Salazar, Pablo M., Cowling, Benjamin J., Lipsitch, Marc, Leung, Gabriel M.
Publicado 2020

How to detect and reduce potential sources of biases in studies of SARS-CoV-2 and COVID-19

por Accorsi, Emma K., Qiu, Xueting, Rumpler, Eva, Kennedy-Shaffer, Lee, Kahn, Rebecca, Joshi, Keya, Goldstein, Edward, Stensrud, Mats J., Niehus, Rene, Cevik, Muge, Lipsitch, Marc
Publicado 2021

Quantifying antibiotic impact on within-patient dynamics of extended-spectrum beta-lactamase resistance

por Niehus, Rene, van Kleef, Esther, Mo, Yin, Turlej-Rogacka, Agata, Lammens, Christine, Carmeli, Yehuda, Goossens, Herman, Tacconelli, Evelina, Carevic, Biljana, Preotescu, Liliana, Malhotra-Kumar, Surbhi, Cooper, Ben S
Publicado 2020

The influence of COVID-19 risk perception and vaccination status on the number of social contacts across Europe: insights from the CoMix study

por Wambua, James, Loedy, Neilshan, Jarvis, Christopher I., Wong, Kerry L. M., Faes, Christel, Grah, Rok, Prasse, Bastian, Sandmann, Frank, Niehus, Rene, Johnson, Helen, Edmunds, W.John, Beutels, Philippe, Hens, Niel, Coletti, Pietro
Publicado 2023

Estimating internationally imported cases during the early COVID-19 pandemic

por Menkir, Tigist F., Chin, Taylor, Hay, James, Surface, Erik D., De Salazar, Pablo M., Buckee, Caroline O., Watts, Alexander, Khan, Kamran, Sherbo, Ryan, Yan, Ada W. C., Mina, Michael, Lipsitch, Marc, Niehus, Rene
Publicado 2020

Estimating internationally imported cases during the early COVID-19 pandemic

por Menkir, Tigist F., Chin, Taylor, Hay, James A., Surface, Erik D., De Salazar, Pablo M., Buckee, Caroline O., Watts, Alexander, Khan, Kamran, Sherbo, Ryan, Yan, Ada W. C., Mina, Michael J., Lipsitch, Marc, Niehus, Rene
Publicado 2021

Public health considerations for transitioning beyond the acute phase of the COVID-19 pandemic in the EU/EEA

por Suk, Jonathan E, Pharris, Anastasia, Beauté, Julien, Colzani, Edoardo, Needham, Howard, Kinsman, John, Niehus, Rene, Grah, Rok, Omokanye, Ajibola, Plachouras, Diamantis, Baka, Agoritsa, Prasse, Bastian, Sandmann, Frank, Severi, Ettore, Alm, Erik, Wiltshire, Emma, Ciancio, Bruno
Publicado 2022

Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study across Ca...

por Auguet, Olga Tosas, Niehus, Rene, Gweon, Hyun Soon, Berkley, James A., Waichungo, Joseph, Njim, Tsi, Edgeworth, Jonathan D., Batra, Rahul, Chau, Kevin, Swann, Jeremy, Walker, Sarah A., Peto, Tim E.A., Crook, Derrick W., Lamble, Sarah, Turner, Paul, Cooper, Ben S., Stoesser, Nicole
Publicado 2021

The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples

por Gweon, H. Soon, Shaw, Liam P., Swann, Jeremy, De Maio, Nicola, AbuOun, Manal, Niehus, Rene, Hubbard, Alasdair T. M., Bowes, Mike J., Bailey, Mark J., Peto, Tim E. A., Hoosdally, Sarah J., Walker, A. Sarah, Sebra, Robert P., Crook, Derrick W., Anjum, Muna F., Read, Daniel S., Stoesser, Nicole
Publicado 2019

Practical considerations for measuring the effective reproductive number, R(t)

por Gostic, Katelyn M., McGough, Lauren, Baskerville, Edward B., Abbott, Sam, Joshi, Keya, Tedijanto, Christine, Kahn, Rebecca, Niehus, Rene, Hay, James, De Salazar, Pablo M., Hellewell, Joel, Meakin, Sophie, Munday, James, Bosse, Nikos I., Sherrat, Katharine, Thompson, Robin N., White, Laura F., Huisman, Jana S., Scire, Jérémie, Bonhoeffer, Sebastian, Stadler, Tanja, Wallinga, Jacco, Funk, Sebastian, Lipsitch, Marc, Cobey, Sarah
Publicado 2020

The gut microbiota is associated with immune cell dynamics in humans

por Schluter, Jonas, Peled, Jonathan U., Taylor, Bradford P., Markey, Kate A., Smith, Melody, Taur, Ying, Niehus, Rene, Staffas, Anna, Dai, Anqi, Fontana, Emily, Amoretti, Luigi A., Wright, Roberta J., Morjaria, Sejal, Fenelus, Maly, Pessin, Melissa S., Chao, Nelson J., Lew, Meagan, Bohannon, Lauren, Bush, Amy, Sung, Anthony D., Hohl, Tobias M., Perales, Miguel-Angel, van den Brink, Marcel R.M., Xavier, Joao B.
Publicado 2020

Practical considerations for measuring the effective reproductive number, R(t)

por Gostic, Katelyn M., McGough, Lauren, Baskerville, Edward B., Abbott, Sam, Joshi, Keya, Tedijanto, Christine, Kahn, Rebecca, Niehus, Rene, Hay, James A., De Salazar, Pablo M., Hellewell, Joel, Meakin, Sophie, Munday, James D., Bosse, Nikos I., Sherrat, Katharine, Thompson, Robin N., White, Laura F., Huisman, Jana S., Scire, Jérémie, Bonhoeffer, Sebastian, Stadler, Tanja, Wallinga, Jacco, Funk, Sebastian, Lipsitch, Marc, Cobey, Sarah
Publicado 2020

Correction: Practical considerations for measuring the effective reproductive number, R(t)

por Gostic, Katelyn M., McGough, Lauren, Baskerville, Edward B., Abbott, Sam, Joshi, Keya, Tedijanto, Christine, Kahn, Rebecca, Niehus, Rene, Hay, James A., De Salazar, Pablo M., Hellewell, Joel, Meakin, Sophie, Munday, James D., Bosse, Nikos I., Sherrat, Katharine, Thompson, Robin N., White, Laura F., Huisman, Jana S., Scire, Jérémie, Bonhoeffer, Sebastian, Stadler, Tanja, Wallinga, Jacco, Funk, Sebastian, Lipsitch, Marc, Cobey, Sarah
Publicado 2021