Combinatorial Ranking of Gene Sets to Predict Disease Relapse: The Retinoic Acid Pathway in Early Prostate Cancer

por Nim, Hieu T., Furtado, Milena B., Ramialison, Mirana, Boyd, Sarah E.
Publicado 2017

From whole-mount to single-cell spatial assessment of gene expression in 3D

por Waylen, Lisa N., Nim, Hieu T., Martelotto, Luciano G., Ramialison, Mirana
Publicado 2020

Spatially resolved transcriptomics in immersive environments

por Bienroth, Denis, Nim, Hieu T., Garkov, Dimitar, Klein, Karsten, Jaeger-Honz, Sabrina, Ramialison, Mirana, Schreiber, Falk
Publicado 2022

VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery

por Nim, Hieu T, Furtado, Milena B, Costa, Mauro W, Rosenthal, Nadia A, Kitano, Hiroaki, Boyd, Sarah E
Publicado 2015

CARFMAP: A Curated Pathway Map of Cardiac Fibroblasts

por Nim, Hieu T., Furtado, Milena B., Costa, Mauro W., Kitano, Hiroaki, Rosenthal, Nadia A., Boyd, Sarah E.
Publicado 2015

Disease course following High Disease Activity Status revealed patterns in SLE

por Hoi, Alberta, Koelmeyer, Rachel, Bonin, Julie, Sun, Ying, Kao, Amy, Gunther, Oliver, Nim, Hieu T., Morand, Eric
Publicado 2021

Microarray profiling to analyse adult cardiac fibroblast identity

por Furtado, Milena B., Nim, Hieu T., Gould, Jodee A., Costa, Mauro W., Rosenthal, Nadia A., Boyd, Sarah E.
Publicado 2014

High disease activity status suggests more severe disease and damage accrual in systemic lupus erythematosus

por Koelmeyer, Rachel, Nim, Hieu Tri, Nikpour, Mandana, Sun, Ying B, Kao, Amy, Guenther, Oliver, Morand, Eric, Hoi, Alberta
Publicado 2020

Novel Methods of Incorporating Time in Longitudinal Multivariate Analysis Reveals Hidden Associations With Disease Activity in Systemic Lupus Erythematosus

por Nim, Hieu T., Connelly, Kathryn, Vincent, Fabien B., Petitjean, François, Hoi, Alberta, Koelmeyer, Rachel, Boyd, Sarah E., Morand, Eric F.
Publicado 2019

MonaGO: a novel gene ontology enrichment analysis visualisation system

por Xin, Ziyin, Cai, Yujun, Dang, Louis T., Burke, Hannah M. S., Revote, Jerico, Charitakis, Natalie, Bienroth, Denis, Nim, Hieu T., Li, Yuan-Fang, Ramialison, Mirana
Publicado 2022

CD90 Marks a Mesenchymal Program in Human Thymic Epithelial Cells In Vitro and In Vivo

por Sun, Shicheng, Li, Jacky Y., Nim, Hieu T., Piers, Adam, Ramialison, Mirana, Porrello, Enzo R., Konstantinov, Igor E., Elefanty, Andrew G., Stanley, Edouard G.
Publicado 2022

Human pluripotent stem cell-derived macrophages host Mycobacterium abscessus infection

por Sun, Shicheng, See, Michael, Nim, Hieu T., Strumila, Kathleen, Ng, Elizabeth S., Hidalgo, Alejandro, Ramialison, Mirana, Sutton, Philip, Elefanty, Andrew G., Sarkar, Sohinee, Stanley, Edouard G.
Publicado 2022

Adult mouse fibroblasts retain organ-specific transcriptomic identity

por Forte, Elvira, Ramialison, Mirana, Nim, Hieu T, Mara, Madison, Li, Jacky Y, Cohn, Rachel, Daigle, Sandra L, Boyd, Sarah, Stanley, Edouard G, Elefanty, Andrew G, Hinson, John Travis, Costa, Mauro W, Rosenthal, Nadia A, Furtado, Milena B
Publicado 2022

A cis-regulatory-directed pipeline for the identification of genes involved in cardiac development and disease

por Nim, Hieu T., Dang, Louis, Thiyagarajah, Harshini, Bakopoulos, Daniel, See, Michael, Charitakis, Natalie, Sibbritt, Tennille, Eichenlaub, Michael P., Archer, Stuart K., Fossat, Nicolas, Burke, Richard E., Tam, Patrick P. L., Warr, Coral G., Johnson, Travis K., Ramialison, Mirana
Publicado 2021

TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets

por Dang, Louis T., Tondl, Markus, Chiu, Man Ho H., Revote, Jerico, Paten, Benedict, Tano, Vincent, Tokolyi, Alex, Besse, Florence, Quaife-Ryan, Greg, Cumming, Helen, Drvodelic, Mark J., Eichenlaub, Michael P., Hallab, Jeannette C., Stolper, Julian S., Rossello, Fernando J., Bogoyevitch, Marie A., Jans, David A., Nim, Hieu T., Porrello, Enzo R., Hudson, James E., Ramialison, Mirana
Publicado 2018

GWAS of stool frequency provides insights into gastrointestinal motility and irritable bowel syndrome

por Bonfiglio, Ferdinando, Liu, Xingrong, Smillie, Christopher, Pandit, Anita, Kurilshikov, Alexander, Bacigalupe, Rodrigo, Zheng, Tenghao, Nim, Hieu, Garcia-Etxebarria, Koldo, Bujanda, Luis, Andreasson, Anna, Agreus, Lars, Walter, Susanna, Abecasis, Gonçalo, Eijsbouts, Chris, Jostins, Luke, Parkes, Miles, Hughes, David A., Timpson, Nicholas, Raes, Jeroen, Franke, Andre, Kennedy, Nicholas A., Regev, Aviv, Zhernakova, Alexandra, Simren, Magnus, Camilleri, Michael, D’Amato, Mauro
Publicado 2021

Enduring epigenetic landmarks define the cancer microenvironment

por Pidsley, Ruth, Lawrence, Mitchell G., Zotenko, Elena, Niranjan, Birunthi, Statham, Aaron, Song, Jenny, Chabanon, Roman M., Qu, Wenjia, Wang, Hong, Richards, Michelle, Nair, Shalima S., Armstrong, Nicola J., Nim, Hieu T., Papargiris, Melissa, Balanathan, Preetika, French, Hugh, Peters, Timothy, Norden, Sam, Ryan, Andrew, Pedersen, John, Kench, James, Daly, Roger J., Horvath, Lisa G., Stricker, Phillip, Frydenberg, Mark, Taylor, Renea A., Stirzaker, Clare, Risbridger, Gail P., Clark, Susan J.
Publicado 2018

Parallel use of human stem cell lung and heart models provide insights for SARS-CoV-2 treatment

por Rudraraju, Rajeev, Gartner, Matthew J., Neil, Jessica A., Stout, Elizabeth S., Chen, Joseph, Needham, Elise J., See, Michael, Mackenzie-Kludas, Charley, Yang Lee, Leo Yi, Wang, Mingyang, Pointer, Hayley, Karavendzas, Kathy, Abu-Bonsrah, Dad, Drew, Damien, Yang Sun, Yu Bo, Tan, Jia Ping, Sun, Guizhi, Salavaty, Adrian, Charitakis, Natalie, Nim, Hieu T., Currie, Peter D., Tham, Wai-Hong, Porrello, Enzo, Polo, Jose M., Humphrey, Sean J., Ramialison, Mirana, Elliott, David A., Subbarao, Kanta
Publicado 2023