Cell Spotter (CSPOT): A machine-learning approach to automated cell spotting and quantification of highly multiplexed tissue images

por Nirmal, Ajit J., Yapp, Clarence, Santagata, Sandro, Sorger, Peter K.
Publicado 2023

Derivation of marker gene signatures from human skin and their use in the interpretation of the transcriptional changes associated with dermatological disorders

por Shih, Barbara B, Nirmal, Ajit J, Headon, Denis J, Akbar, Arne N, Mabbott, Neil A, Freeman, Tom C
Publicado 2017

Transcriptomics Analysis of Porcine Caudal Dorsal Root Ganglia in Tail Amputated Pigs Shows Long-Term Effects on Many Pain-Associated Genes

por Sandercock, Dale A., Barnett, Mark W., Coe, Jennifer E., Downing, Alison C., Nirmal, Ajit J., Di Giminiani, Pierpaolo, Edwards, Sandra A., Freeman, Tom C.
Publicado 2019

Macrophage colony-stimulating factor increases hepatic macrophage content, liver growth, and lipid accumulation in neonatal rats

por Pridans, Clare, Sauter, Kristin A., Irvine, Katharine M., Davis, Gemma M., Lefevre, Lucas, Raper, Anna, Rojo, Rocio, Nirmal, Ajit J., Beard, Philippa, Cheeseman, Michael, Hume, David A.
Publicado 2018

Multiplexed and reproducible high content screening of live and fixed cells using Dye Drop

por Mills, Caitlin E., Subramanian, Kartik, Hafner, Marc, Niepel, Mario, Gerosa, Luca, Chung, Mirra, Victor, Chiara, Gaudio, Benjamin, Yapp, Clarence, Nirmal, Ajit J., Clark, Nicholas, Sorger, Peter K.
Publicado 2022

Durable engraftment of genetically modified FVIII‐secreting autologous bone marrow stromal cells in the intramedullary microenvironment

por Lee, Sze Sing, Sivalingam, Jaichandran, Nirmal, Ajit J., Ng, Wai Har, Kee, Irene, Song, In Chin, Kiong, Chin Yong, Gales, Kristoffer A., Chua, Frederic, Pena, Edgar M., Ogden, Bryan E., Kon, Oi Lian
Publicado 2018

The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

por Nirmal, Ajit J., Maliga, Zoltan, Vallius, Tuulia, Quattrochi, Brian, Chen, Alyce A., Jacobson, Connor A., Pelletier, Roxanne J., Yapp, Clarence, Arias-Camison, Raquel, Chen, Yu-An, Lian, Christine G., Murphy, George F., Santagata, Sandro, Sorger, Peter K.
Publicado 2022

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

por Schapiro, Denis, Sokolov, Artem, Yapp, Clarence, Chen, Yu-An, Muhlich, Jeremy L., Hess, Joshua, Creason, Allison L., Nirmal, Ajit J., Baker, Gregory J., Nariya, Maulik K., Lin, Jia-Ren, Maliga, Zoltan, Jacobson, Connor A., Hodgman, Matthew W., Ruokonen, Juha, Farhi, Samouil L., Abbondanza, Domenic, McKinley, Eliot T., Persson, Daniel, Betts, Courtney, Sivagnanam, Shamilene, Regev, Aviv, Goecks, Jeremy, Coffey, Robert J., Coussens, Lisa M., Santagata, Sandro, Sorger, Peter K.
Publicado 2021