Unmet need for liquid biomarkers and the Brain-Liquid Biopsy Consortium

por Short, Susan C, Noushmehr, Houtan
Publicado 2022

Expression and regulatory roles of lncRNAs in G-CIMP-low vs G-CIMP-high Glioma: an in-silico analysis

por Datta, Indrani, Noushmehr, Houtan, Brodie, Chaya, Poisson, Laila M.
Publicado 2021

Noninvasive approaches to detect methylation-based markers to monitor gliomas

por Noushmehr, Houtan, Herrgott, Grayson, Morosini, Natalia S, Castro, Ana Valeria
Publicado 2022

MLTI-05. IDENTIFYING BRAIN METASTATIC CASES FROM FREE TEXT CLINICAL NARRATIVES WITH REFINEMENT OF SEMANTIC HETEROGENEITY USING MACHINE LEARNING

por Wells, Michael, Robin, Adam, Poisson, Laila, Noushmehr, Houtan, Snyder, James
Publicado 2019

Gene Reactivation by 5-Aza-2′-Deoxycytidine–Induced Demethylation Requires SRCAP–Mediated H2A.Z Insertion to Establish Nucleosome Depleted Regions

por Yang, Xiaojing, Noushmehr, Houtan, Han, Han, Andreu-Vieyra, Claudia, Liang, Gangning, Jones, Peter A.
Publicado 2012

FunciSNP: an R/bioconductor tool integrating functional non-coding data sets with genetic association studies to identify candidate regulatory SNPs

por Coetzee, Simon G., Rhie, Suhn K., Berman, Benjamin P., Coetzee, Gerhard A., Noushmehr, Houtan
Publicado 2012

Hemizygous CDKN2A deletion confers worse survival outcomes in IDHmut-noncodel gliomas

por Kocakavuk, Emre, Johnson, Kevin C, Sabedot, Thais S, Reinhardt, Hans Christian, Noushmehr, Houtan, Verhaak, Roel G W
Publicado 2023

Genome-wide Runx2 occupancy in prostate cancer cells suggests a role in regulating secretion

por Little, Gillian H., Noushmehr, Houtan, Baniwal, Sanjeev K., Berman, Benjamin P., Coetzee, Gerhard A., Frenkel, Baruch
Publicado 2012

Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cells

por Rhie, Suhn Kyong, Hazelett, Dennis J, Coetzee, Simon G, Yan, Chunli, Noushmehr, Houtan, Coetzee, Gerhard A
Publicado 2014

TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

por Silva, Tiago C., Colaprico, Antonio, Olsen, Catharina, D'Angelo, Fulvio, Bontempi, Gianluca, Ceccarelli, Michele, Noushmehr, Houtan
Publicado 2016

TBMT-02. APOLLO: RAMAN-BASED PATHOLOGY OF MALIGNANT GLIOMA

por Lita, Adrian, Sjöberg, Joel, Filipescu, Stefan, Celiku, Orieta, Petre, Luigia, Gilbert, Mark, Noushmehr, Houtan, Petre, Ion, Larion, Mioara
Publicado 2021

Comprehensive Functional Annotation of Seventy-One Breast Cancer Risk Loci

por Rhie, Suhn Kyong, Coetzee, Simon G., Noushmehr, Houtan, Yan, Chunli, Kim, Jae Mun, Haiman, Christopher A., Coetzee, Gerhard A.
Publicado 2013

New functionalities in the TCGAbiolinks package for the study and integration of cancer data from GDC and GTEx

por Mounir, Mohamed, Lucchetta, Marta, Silva, Tiago C., Olsen, Catharina, Bontempi, Gianluca, Chen, Xi, Noushmehr, Houtan, Colaprico, Antonio, Papaleo, Elena
Publicado 2019

SpidermiR: An R/Bioconductor Package for Integrative Analysis with miRNA Data

por Cava, Claudia, Colaprico, Antonio, Bertoli, Gloria, Graudenzi, Alex, Silva, Tiago C., Olsen, Catharina, Noushmehr, Houtan, Bontempi, Gianluca, Mauri, Giancarlo, Castiglioni, Isabella
Publicado 2017

ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles

por Silva, Tiago C, Coetzee, Simon G, Gull, Nicole, Yao, Lijing, Hazelett, Dennis J, Noushmehr, Houtan, Lin, De-Chen, Berman, Benjamin P
Publicado 2019

OTEH-10. Evolutionary trajectory of epigenomic of gliomas

por Malta, Tathiane, Sabedot, Thais, Datta, Indrani, Varn, Frederick, Castro, AnaValeria, Garofano, Luciano, Verhaak, Roel, Iavarone, Antonio, Poisson, Laila, Noushmehr, Houtan
Publicado 2021

Optimizing exosomal RNA isolation for RNA-Seq analyses of archival sera specimens

por Prendergast, Emily N., de Souza Fonseca, Marcos Abraão, Dezem, Felipe Segato, Lester, Jenny, Karlan, Beth Y., Noushmehr, Houtan, Lin, Xianzhi, Lawrenson, Kate
Publicado 2018

RGBM: regularized gradient boosting machines for identification of the transcriptional regulators of discrete glioma subtypes

por Mall, Raghvendra, Cerulo, Luigi, Garofano, Luciano, Frattini, Veronique, Kunji, Khalid, Bensmail, Halima, Sabedot, Thais S, Noushmehr, Houtan, Lasorella, Anna, Iavarone, Antonio, Ceccarelli, Michele
Publicado 2018

OR24-5 Aberrant DNA Methylation in Regulatory Genomic Elements Are Associated with Invasive Behavior of Pituitary Macroadenomas: An Integrative Analysis of Epigenome-Wide Studies

por Mosella, Maritza, Sabedot, Thais, Malta, Tathiane, Felicella, Michelle, Aho, Todd, Poisson, Laila, deCarvalho, Ana, Noushmehr, Houtan, Rock, Jack, Castro, Ana Valeria
Publicado 2019

Clinical and research applications of a brain tumor tissue bank in the age of precision medicine

por Snyder, James, Poisson, Laila M, Noushmehr, Houtan, Castro, Ana V, deCarvalho, Ana C, Robin, Adam, Mukherjee, Abir, Lee, Ian, Walbert, Tobias
Publicado 2019