A graph extension of the positional Burrows–Wheeler transform and its applications

por Novak, Adam M., Garrison, Erik, Paten, Benedict
Publicado 2017

How reliably can we predict the reliability of protein structure predictions?

por Miklós, István, Novák ', Ádám, Dombai, Balázs, Hein, Jotun
Publicado 2008

Reticular alignment: A progressive corner-cutting method for multiple sequence alignment

por Szabó, Adrienn, Novák, Ádám, Miklós, István, Hein, Jotun
Publicado 2010

BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC

por Satija, Rahul, Novák, Ádám, Miklós, István, Lyngsø, Rune, Hein, Jotun
Publicado 2009

Genome graphs and the evolution of genome inference

por Paten, Benedict, Novak, Adam M., Eizenga, Jordan M., Garrison, Erik
Publicado 2017

Haplotype-aware graph indexes

por Sirén, Jouni, Garrison, Erik, Novak, Adam M, Paten, Benedict, Durbin, Richard
Publicado 2019

Distance indexing and seed clustering in sequence graphs

por Chang, Xian, Eizenga, Jordan, Novak, Adam M, Sirén, Jouni, Paten, Benedict
Publicado 2020

Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs

por Herman, Joseph L, Novák, Ádám, Lyngsø, Rune, Szabó, Adrienn, Miklós, István, Hein, Jotun
Publicado 2015

A graph-based approach to diploid genome assembly

por Garg, Shilpa, Rautiainen, Mikko, Novak, Adam M, Garrison, Erik, Durbin, Richard, Marschall, Tobias
Publicado 2018

Oil-Based Mud Waste as a Filler Material in LDPE Composites: Evaluation of Mechanical Properties

por Siddique, Shohel, Novak, Adam, Guliyev, Emin, Yates, Kyari, Leung, Pak Sing, Njuguna, James
Publicado 2022

Characterising RNA secondary structure space using information entropy

por Sükösd, Zsuzsanna, Knudsen, Bjarne, Anderson, James WJ, Novák, Ádám, Kjems, Jørgen, Pedersen, Christian NS
Publicado 2013

Quantifying variances in comparative RNA secondary structure prediction

por Anderson, James WJ, Novák, Ádám, Sükösd, Zsuzsanna, Golden, Michael, Arunapuram, Preeti, Edvardsson, Ingolfur, Hein, Jotun
Publicado 2013

Sequence tube maps: making graph genomes intuitive to commuters

por Beyer, Wolfgang, Novak, Adam M, Hickey, Glenn, Chan, Jeffrey, Tan, Vanessa, Paten, Benedict, Zerbino, Daniel R
Publicado 2019

Genotyping structural variants in pangenome graphs using the vg toolkit

por Hickey, Glenn, Heller, David, Monlong, Jean, Sibbesen, Jonas A., Sirén, Jouni, Eizenga, Jordan, Dawson, Eric T., Garrison, Erik, Novak, Adam M., Paten, Benedict
Publicado 2020

Signaling through Syk or CARD9 Mediates Species-Specific Anti-Candida Protection in Bone Marrow Chimeric Mice

por Zajta, Erik, Csonka, Katalin, Tóth, Adél, Tiszlavicz, Laszló, Németh, Tamás, Orosz, Anita, Novák, Ádám, Csikós, Máté, Vágvölgyi, Csaba, Mócsai, Attila, Gácser, Attila
Publicado 2021

Modeling the Role of Negative Cooperativity in Metabolic Regulation and Homeostasis

por Bush, Eliot C., Clark, Anne E., DeBoever, Chris M., Haynes, Lillian E., Hussain, Sidra, Ma, Singer, McDermott, Matthew M., Novak, Adam M., Wentworth, John S.
Publicado 2012

Correction: Modeling the Role of Negative Cooperativity in Metabolic Regulation and Homeostasis

por Bush, Eliot C., Clark, Anne E., DeBoever, Chris M., Haynes, Lillian E., Hussain, Sidra, Ma, Singer, McDermott, Matthew B.A., Novak, Adam M., Wentworth, John S.
Publicado 2013

Variation graph toolkit improves read mapping by representing genetic variation in the reference

por Garrison, Erik, Sirén, Jouni, Novak, Adam M., Hickey, Glenn, Eizenga, Jordan M., Dawson, Eric T., Jones, William, Garg, Shilpa, Markello, Charles, Lin, Michael F., Paten, Benedict, Durbin, Richard
Publicado 2018

Role of Protein Mannosylation in the Candida tropicalis-Host Interaction

por Hernández-Chávez, Marco J., Clavijo-Giraldo, Diana M., Novák, Ádám, Lozoya-Pérez, Nancy E., Martínez-Álvarez, José A., Salinas-Marín, Roberta, Hernández, Nahúm V., Martínez-Duncker, Iván, Gácser, Attila, Mora-Montes, Héctor M.
Publicado 2019

Progressive Cactus is a multiple-genome aligner for the thousand-genome era

por Armstrong, Joel, Hickey, Glenn, Diekhans, Mark, Fiddes, Ian T., Novak, Adam M., Deran, Alden, Fang, Qi, Xie, Duo, Feng, Shaohong, Stiller, Josefin, Genereux, Diane, Johnson, Jeremy, Marinescu, Voichita Dana, Alföldi, Jessica, Harris, Robert S., Lindblad-Toh, Kerstin, Haussler, David, Karlsson, Elinor, Jarvis, Erich D., Zhang, Guojie, Paten, Benedict
Publicado 2020