Exploring the epitranscriptome by native RNA sequencing

por Begik, Oguzhan, Mattick, John S., Novoa, Eva Maria
Publicado 2022

Elucidation of Codon Usage Signatures across the Domains of Life

por Novoa, Eva Maria, Jungreis, Irwin, Jaillon, Olivier, Kellis, Manolis
Publicado 2019

The RNA modification landscape in human disease

por Jonkhout, Nicky, Tran, Julia, Smith, Martin A., Schonrock, Nicole, Mattick, John S., Novoa, Eva Maria
Publicado 2017

Computational methods for RNA modification detection from nanopore direct RNA sequencing data

por Furlan, Mattia, Delgado-Tejedor, Anna, Mulroney, Logan, Pelizzola, Mattia, Novoa, Eva Maria, Leonardi, Tommaso
Publicado 2021

Integrative analyses of the RNA modification machinery reveal tissue- and cancer-specific signatures

por Begik, Oguzhan, Lucas, Morghan C., Liu, Huanle, Ramirez, Jose Miguel, Mattick, John S., Novoa, Eva Maria
Publicado 2020

CHIKV infection reprograms codon optimality to favor viral RNA translation by altering the tRNA epitranscriptome

por Jungfleisch, Jennifer, Böttcher, René, Talló-Parra, Marc, Pérez-Vilaró, Gemma, Merits, Andres, Novoa, Eva Maria, Díez, Juana
Publicado 2022

The lncRNA Snhg11, a new candidate contributing to neurogenesis, plasticity and memory deficits in Down syndrome

por Sierra, Cesar, Sabariego-Navarro, Miguel, Fernández-Blanco, Álvaro, Cruciani, Sonia, Zamora-Moratalla, Alfonsa, Novoa, Eva Maria, Dierssen, Mara
Publicado 2023

MasterOfPores: A Workflow for the Analysis of Oxford Nanopore Direct RNA Sequencing Datasets

por Cozzuto, Luca, Liu, Huanle, Pryszcz, Leszek P., Pulido, Toni Hermoso, Delgado-Tejedor, Anna, Ponomarenko, Julia, Novoa, Eva Maria
Publicado 2020

Molecular barcoding of native RNAs using nanopore sequencing and deep learning

por Smith, Martin A., Ersavas, Tansel, Ferguson, James M., Liu, Huanle, Lucas, Morghan C., Begik, Oguzhan, Bojarski, Lilly, Barton, Kirston, Novoa, Eva Maria
Publicado 2020

Saturation of recognition elements blocks evolution of new tRNA identities

por Saint-Léger, Adélaïde, Bello, Carla, Dans, Pablo D., Torres, Adrian Gabriel, Novoa, Eva Maria, Camacho, Noelia, Orozco, Modesto, Kondrashov, Fyodor A., Ribas de Pouplana, Lluís
Publicado 2016

Accurate detection of m(6)A RNA modifications in native RNA sequences

por Liu, Huanle, Begik, Oguzhan, Lucas, Morghan C., Ramirez, Jose Miguel, Mason, Christopher E., Wiener, David, Schwartz, Schraga, Mattick, John S., Smith, Martin A., Novoa, Eva Maria
Publicado 2019

High-throughput 5′ UTR engineering for enhanced protein production in non-viral gene therapies

por Cao, Jicong, Novoa, Eva Maria, Zhang, Zhizhuo, Chen, William C. W., Liu, Dianbo, Choi, Gigi C. G., Wong, Alan S. L., Wehrspaun, Claudia, Kellis, Manolis, Lu, Timothy K.
Publicado 2021

Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing

por Begik, Oguzhan, Diensthuber, Gregor, Liu, Huanle, Delgado-Tejedor, Anna, Kontur, Cassandra, Niazi, Adnan Muhammad, Valen, Eivind, Giraldez, Antonio J., Beaudoin, Jean-Denis, Mattick, John S., Novoa, Eva Maria
Publicado 2022

Dynamic interplay between RPL3- and RPL3L-containing ribosomes modulates mitochondrial activity in the mammalian heart

por Milenkovic, Ivan, Santos Vieira, Helaine Graziele, Lucas, Morghan C, Ruiz-Orera, Jorge, Patone, Giannino, Kesteven, Scott, Wu, Jianxin, Feneley, Michael, Espadas, Guadalupe, Sabidó, Eduard, Hübner, Norbert, van Heesch, Sebastiaan, Völkers, Mirko, Novoa, Eva Maria
Publicado 2023

Human tRNAs with inosine 34 are essential to efficiently translate eukarya-specific low-complexity proteins

por Torres, Adrian Gabriel, Rodríguez-Escribà, Marta, Marcet-Houben, Marina, Santos Vieira, Helaine Graziele, Camacho, Noelia, Catena, Helena, Murillo Recio, Marina, Rafels-Ybern, Àlbert, Reina, Oscar, Torres, Francisco Miguel, Pardo-Saganta, Ana, Gabaldón, Toni, Novoa, Eva Maria, Ribas de Pouplana, Lluís
Publicado 2021