Transcriptomics in a high throughput world

por Nusbaum, Chad
Publicado 2010

How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?

por Haas, Brian J, Chin, Melissa, Nusbaum, Chad, Birren, Bruce W, Livny, Jonathan
Publicado 2012

Pacific biosciences sequencing technology for genotyping and variation discovery in human data

por Carneiro, Mauricio O, Russ, Carsten, Ross, Michael G, Gabriel, Stacey B, Nusbaum, Chad, DePristo, Mark A
Publicado 2012

Comprehensive comparative analysis of strand-specific RNA sequencing methods

por Levin, Joshua Z., Yassour, Moran, Adiconis, Xian, Nusbaum, Chad, Thompson, Dawn Anne, Friedman, Nir, Gnirke, Andreas, Regev, Aviv
Publicado 2010

Closing gaps in the human genome using sequencing by synthesis

por Garber, Manuel, Zody, Michael C, Arachchi, Harindra M, Berlin, Aaron, Gnerre, Sante, Green, Lisa M, Lennon, Niall, Nusbaum, Chad
Publicado 2009

High-Resolution Description of Antibody Heavy-Chain Repertoires in Humans

por Arnaout, Ramy, Lee, William, Cahill, Patrick, Honan, Tracey, Sparrow, Todd, Weiand, Michael, Nusbaum, Chad, Rajewsky, Klaus, Koralov, Sergei B.
Publicado 2011

Correction: Closing gaps in the human genome using sequencing by synthesis

por Garber, Manuel, Zody, Michael C, Arachchi, Harindra C, Berlin, Aaron, Gnerre, Sante, Green, Lisa M, Lennon, Niall, Nusbaum, Chad
Publicado 2011

Characterizing and measuring bias in sequence data

por Ross, Michael G, Russ, Carsten, Costello, Maura, Hollinger, Andrew, Lennon, Niall J, Hegarty, Ryan, Nusbaum, Chad, Jaffe, David B
Publicado 2013

Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species

por Yassour, Moran, Pfiffner, Jenna, Levin, Joshua Z, Adiconis, Xian, Gnirke, Andreas, Nusbaum, Chad, Thompson, Dawn-Anne, Friedman, Nir, Regev, Aviv
Publicado 2010

Use of the MS2 aptamer and coat protein for RNA localization in yeast: A response to “MS2 coat proteins bound to yeast mRNAs block 5′ to 3′ degradation and trap mRNA decay products...

por Haimovich, Gal, Zabezhinsky, Dmitry, Haas, Brian, Slobodin, Boris, Purushothaman, Pravinkumar, Fan, Lin, Levin, Joshua Z., Nusbaum, Chad, Gerst, Jeffrey E.
Publicado 2016

Genome Sequence of Spizellomyces punctatus

por Russ, Carsten, Lang, B. Franz, Chen, Zehua, Gujja, Sharvari, Shea, Terrance, Zeng, Qiandong, Young, Sarah, Cuomo, Christina A., Nusbaum, Chad
Publicado 2016

Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts

por Levin, Joshua Z, Berger, Michael F, Adiconis, Xian, Rogov, Peter, Melnikov, Alexandre, Fennell, Timothy, Nusbaum, Chad, Garraway, Levi A, Gnirke, Andreas
Publicado 2009

Analyzing and minimizing bias in Illumina sequencing libraries

por Aird, Daniel, Chen, Wei-Shen, Ross, Michael, Connolly, Kristen, Meldrim, Jim, Russ, Carsten, Fisher, Sheila, Jaffe, David, Nusbaum, Chad, Gnirke, Andreas
Publicado 2010

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

por Aird, Daniel, Ross, Michael G, Chen, Wei-Sheng, Danielsson, Maxwell, Fennell, Timothy, Russ, Carsten, Jaffe, David B, Nusbaum, Chad, Gnirke, Andreas
Publicado 2011

Regulated aggregative multicellularity in a close unicellular relative of metazoa

por Sebé-Pedrós, Arnau, Irimia, Manuel, del Campo, Javier, Parra-Acero, Helena, Russ, Carsten, Nusbaum, Chad, Blencowe, Benjamin J, Ruiz-Trillo, Iñaki
Publicado 2013

Massively Parallel Sequencing of Human Urinary Exosome/Microvesicle RNA Reveals a Predominance of Non-Coding RNA

por Miranda, Kevin C., Bond, Daniel T., Levin, Joshua Z., Adiconis, Xian, Sivachenko, Andrey, Russ, Carsten, Brown, Dennis, Nusbaum, Chad, Russo, Leileata M.
Publicado 2014

Multiplexed mRNA assembly into ribonucleoprotein particles plays an operon-like role in the control of yeast cell physiology

por Nair, Rohini R, Zabezhinsky, Dmitry, Gelin-Licht, Rita, Haas, Brian J, Dyhr, Michael CA, Sperber, Hannah S, Nusbaum, Chad, Gerst, Jeffrey E
Publicado 2021

Development and evaluation of RNA-seq methods

por Levin, Joshua, Adiconis, Xian, Yassour, Moran, Thompson, Dawn, Guttman, Mitchell, Berger, Michael, Fan, Lin, Friedman, Nir, Nusbaum, Chad, Gnirke, Andreas, Regev, Aviv
Publicado 2010

Evaluation of bacterial ribosomal RNA (rRNA) depletion methods for sequencing microbial community transcriptomes

por Ciulla, Dawn, Giannoukos, Georgia, Earl, Ashlee, Feldgarden, Michael, Gevers, Dirk, Levin, Joshua, Livny, Jonathan, Ward, Doyle, Gnirke, Andreas, Nusbaum, Chad, Birren, Bruce
Publicado 2010

Draft Genome Sequence of Cercospora arachidicola, Causal Agent of Early Leaf Spot in Peanuts

por Orner, Valerie A., Cantonwine, Emily G., Wang, Xinye Monica, Abouelleil, Amr, Bochicchio, James, Nusbaum, Chad, Culbreath, Albert K., Abdo, Zaid, Arias, Renee S.
Publicado 2015