polyClustR: defining communities of reconciled cancer subtypes with biological and prognostic significance

por Eason, Katherine, Nyamundanda, Gift, Sadanandam, Anguraj
Publicado 2018

Probabilistic principal component analysis for metabolomic data

por Nyamundanda, Gift, Brennan, Lorraine, Gormley, Isobel Claire
Publicado 2010

A Novel Statistical Method to Diagnose, Quantify and Correct Batch Effects in Genomic Studies

por Nyamundanda, Gift, Poudel, Pawan, Patil, Yatish, Sadanandam, Anguraj
Publicado 2017

A Machine-Learning Tool Concurrently Models Single Omics and Phenome Data for Functional Subtyping and Personalized Cancer Medicine

por Nyamundanda, Gift, Eason, Katherine, Guinney, Justin, Lord, Christopher J., Sadanandam, Anguraj
Publicado 2020

MetSizeR: selecting the optimal sample size for metabolomic studies using an analysis based approach

por Nyamundanda, Gift, Gormley, Isobel Claire, Fan, Yue, Gallagher, William M, Brennan, Lorraine
Publicado 2013

Heterocellular gene signatures reveal luminal-A breast cancer heterogeneity and differential therapeutic responses

por Poudel, Pawan, Nyamundanda, Gift, Patil, Yatish, Cheang, Maggie Chon U, Sadanandam, Anguraj
Publicado 2019

Analytical Validation of Multiplex Biomarker Assay to Stratify Colorectal Cancer into Molecular Subtypes

por Ragulan, Chanthirika, Eason, Katherine, Fontana, Elisa, Nyamundanda, Gift, Tarazona, Noelia, Patil, Yatish, Poudel, Pawan, Lawlor, Rita T., Del Rio, Maguy, Koo, Si-Lin, Tan, Wah-Siew, Sclafani, Francesco, Begum, Ruwaida, Teixeira Mendes, Larissa S., Martineau, Pierre, Scarpa, Aldo, Cervantes, Andrés, Tan, Iain Beehuat, Cunningham, David, Sadanandam, Anguraj
Publicado 2019

Detection of postoperative plasma circulating tumour DNA and lack of CDX2 expression as markers of recurrence in patients with localised colon cancer

por Tarazona, Noelia, Gimeno-Valiente, Francisco, Gambardella, Valentina, Huerta, Marisol, Roselló, Susana, Zuniga, Sheila, Calon, Alexandre, Carbonell-Asins, Juan Antonio, Fontana, Elisa, Martinez-Ciarpaglini, Carolina, Eason, Katherine, Rentero-Garrido, Pilar, Fleitas, Tania, Papaccio, Federica, Moro-Valdezate, David, Nyamundanda, Gift, Castillo, Josefa, Espí, Alejandro, Sadanandam, Anguraj, Roda, Desamparados, Cervantes, Andrés
Publicado 2020

Differential and longitudinal immune gene patterns associated with reprogrammed microenvironment and viral mimicry in response to neoadjuvant radiotherapy in rectal cancer

por Wilkins, Anna, Fontana, Elisa, Nyamundanda, Gift, Ragulan, Chanthirika, Patil, Yatish, Mansfield, David, Kingston, Jennifer, Errington-Mais, Fiona, Bottomley, Daniel, von Loga, Katharina, Bye, Hannah, Carter, Paul, Tinkler-Hundal, Emma, Noshirwani, Arish, Downs, Jessica, Dillon, Magnus, Demaria, Sandra, Sebag-Montefiore, David, Harrington, Kevin, West, Nick, Melcher, Alan, Sadanandam, Anguraj
Publicado 2021

Immune landscape, evolution, hypoxia-mediated viral mimicry pathways and therapeutic potential in molecular subtypes of pancreatic neuroendocrine tumours

por Young, Kate, Lawlor, Rita T, Ragulan, Chanthirika, Patil, Yatish, Mafficini, Andrea, Bersani, Samantha, Antonello, Davide, Mansfield, David, Cingarlini, Sara, Landoni, Luca, Pea, Antonio, Luchini, Claudio, Piredda, Liliana, Kannan, Nagarajan, Nyamundanda, Gift, Morganstein, Daniel, Chau, Ian, Wiedenmann, Bertram, Milella, Michele, Melcher, Alan, Cunningham, David, Starling, Naureen, Scarpa, Aldo, Sadanandam, Anguraj
Publicado 2021

Intratumoral Transcriptome Heterogeneity Is Associated With Patient Prognosis and Sidedness in Patients With Colorectal Cancer Treated With Anti-EGFR Therapy From the CO.20 Trial

por Fontana, Elisa, Nyamundanda, Gift, Cunningham, David, Tu, Dongsheng, Cheang, Maggie C.U., Jonker, Derek J., Siu, Lillian L., Sclafani, Francesco, Eason, Katherine, Ragulan, Chanthirika, Bali, Maria Antonietta, Hulkki-Wilson, Sanna, Loree, Jonathan M., Waring, Paul M., Giordano, Mirella, Lawrence, Patrick, Rodrigues, Daniel Nava, Begum, Ruwaida, Shapiro, Jeremy D., Price, Timothy J., Cremolini, Chiara, Starling, Naureen, Pietrantonio, Filippo, Trusolino, Livio, O’Callaghan, Christopher J., Sadanandam, Anguraj
Publicado 2020

Uridine-derived ribose fuels glucose-restricted pancreatic cancer

por Nwosu, Zeribe C., Ward, Matthew H., Sajjakulnukit, Peter, Poudel, Pawan, Ragulan, Chanthirika, Kasperek, Steven, Radyk, Megan, Sutton, Damien, Menjivar, Rosa E., Andren, Anthony, Apiz-Saab, Juan J., Tolstyka, Zachary, Brown, Kristee, Lee, Ho-Joon, Dzierozynski, Lindsey N., He, Xi, PS, Hari, Ugras, Julia, Nyamundanda, Gift, Zhang, Li, Halbrook, Christopher J., Carpenter, Eileen S., Shi, Jiaqi, Shriver, Leah P., Patti, Gary J., Muir, Alexander, Pasca di Magliano, Marina, Sadanandam, Anguraj, Lyssiotis, Costas A.
Publicado 2023

The Consensus Molecular Subtypes of Colorectal Cancer

por Guinney, Justin, Dienstmann, Rodrigo, Wang, Xin, de Reyniès, Aurélien, Schlicker, Andreas, Soneson, Charlotte, Marisa, Laetitia, Roepman, Paul, Nyamundanda, Gift, Angelino, Paolo, Bot, Brian M., Morris, Jeffrey S., Simon, Iris M., Gerster, Sarah, Fessler, Evelyn, de Sousa e Melo, Felipe, Missiaglia, Edoardo, Ramay, Hena, Barras, David, Homicsko, Krisztian, Maru, Dipen, Manyam, Ganiraju C., Broom, Bradley, Boige, Valerie, Perez-Villamil, Beatriz, Laderas, Ted, Salazar, Ramon, Gray, Joe W., Hanahan, Douglas, Tabernero, Josep, Bernards, Rene, Friend, Stephen H., Laurent-Puig, Pierre, Medema, Jan Paul, Sadanandam, Anguraj, Wessels, Lodewyk, Delorenzi, Mauro, Kopetz, Scott, Vermeulen, Louis, Tejpar, Sabine
Publicado 2015