Bridging non-overlapping reads illuminates high-order epistasis between distal protein sites in a GPCR

por Yoo, Justin I., Daugherty, Patrick S., O’Malley, Michelle A.
Publicado 2020

Driving biomass breakdown through engineered cellulosomes

por Gilmore, Sean P, Henske, John K, O'Malley, Michelle A
Publicado 2015

Heterologous transporters from anaerobic fungi bolster fluoride tolerance in Saccharomyces cerevisiae

por Seppälä, Susanna, Yoo, Justin I., Yur, Daniel, O'Malley, Michelle A.
Publicado 2019

Mitochondrial targeting increases specific activity of a heterologous valine assimilation pathway in Saccharomyces cerevisiae

por Solomon, Kevin V., Ovadia, Elisa, Yu, Fujio, Mizunashi, Wataru, O’Malley, Michelle A.
Publicado 2016

Efficient and cost-effective bacterial mRNA sequencing from low input samples through ribosomal RNA depletion

por Wangsanuwat, Chatarin, Heom, Kellie A., Liu, Estella, O’Malley, Michelle A., Dey, Siddharth S.
Publicado 2020

Identification and expression of small multidrug resistance transporters in early‐branching anaerobic fungi

por Seppälä, Susanna, Gierke, Taylor, Schauer, Elizabeth E., Brown, Jennifer L., O'Malley, Michelle A.
Publicado 2023

Non-destructive quantification of anaerobic gut fungi and methanogens in co-culture reveals increased fungal growth rate and changes in metabolic flux relative to mono-culture

por Leggieri, Patrick A., Kerdman-Andrade, Corey, Lankiewicz, Thomas S., Valentine, Megan T., O’Malley, Michelle A.
Publicado 2021

Mapping the membrane proteome of anaerobic gut fungi identifies a wealth of carbohydrate binding proteins and transporters

por Seppälä, Susanna, Solomon, Kevin V., Gilmore, Sean P., Henske, John K., O’Malley, Michelle A.
Publicado 2016

Designing chimeric enzymes inspired by fungal cellulosomes

por Gilmore, Sean P., Lillington, Stephen P., Haitjema, Charles H., de Groot, Randall, O'Malley, Michelle A.
Publicado 2020

A Genomic Catalog of Stress Response Genes in Anaerobic Fungi for Applications in Bioproduction

por Swift, Candice L., Malinov, Nikola G., Mondo, Stephen J., Salamov, Asaf, Grigoriev, Igor V., O'Malley, Michelle A.
Publicado 2021

Structure and enzymatic characterization of CelD endoglucanase from the anaerobic fungus Piromyces finnis

por Dementiev, Alexey, Lillington, Stephen P., Jin, Shiyan, Kim, Youngchang, Jedrzejczak, Robert, Michalska, Karolina, Joachimiak, Andrzej, O’Malley, Michelle A.
Publicado 2023

The Anaerobic Fungi: Challenges and Opportunities for Industrial Lignocellulosic Biofuel Production

por Saye, Luke M. G., Navaratna, Tejas A., Chong, James P. J., O’Malley, Michelle A., Theodorou, Michael K., Reilly, Matthew
Publicado 2021

Genomic and proteomic biases inform metabolic engineering strategies for anaerobic fungi

por Wilken, St. Elmo, Seppälä, Susanna, Lankiewicz, Thomas S., Saxena, Mohan, Henske, John K., Salamov, Asaf A., Grigoriev, Igor V., O’Malley, Michelle A.
Publicado 2019

Cellulosome Localization Patterns Vary across Life Stages of Anaerobic Fungi

por Lillington, Stephen P., Chrisler, William, Haitjema, Charles H., Gilmore, Sean P., Smallwood, Chuck R., Shutthanandan, Vaithiyalingam, Evans, James E., O’Malley, Michelle A.
Publicado 2021

High-quality RNA extraction and the regulation of genes encoding cellulosomes are correlated with growth stage in anaerobic fungi

por Brown, Jennifer L., Gierke, Taylor, Butkovich, Lazarina V., Swift, Candice L., Singan, Vasanth, Daum, Christopher, Barry, Kerrie, Grigoriev, Igor V., O’Malley, Michelle A.
Publicado 2023

Co‑cultivation of anaerobic fungi with Clostridium acetobutylicum bolsters butyrate and butanol production from cellulose and lignocellulose

por Brown, Jennifer L, Perisin, Matthew A, Swift, Candice L, Benyamin, Marcus, Liu, Sanchao, Singan, Vasanth, Zhang, Yu, Savage, Emily, Pennacchio, Christa, Grigoriev, Igor V, O'Malley, Michelle A
Publicado 2022

Transcriptomic characterization of Caecomyces churrovis: a novel, non-rhizoid-forming lignocellulolytic anaerobic fungus

por Henske, John K., Gilmore, Sean P., Knop, Doriv, Cunningham, Francis J., Sexton, Jessica A., Smallwood, Chuck R., Shutthanandan, Vaithiyalingam, Evans, James E., Theodorou, Michael K., O’Malley, Michelle A.
Publicado 2017

Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes

por Peng, Xuefeng, Wilken, St. Elmo, Lankiewicz, Thomas S., Gilmore, Sean P., Brown, Jennifer L., Henske, John K., Swift, Candice L., Salamov, Asaf, Barry, Kerrie, Grigoriev, Igor V., Theodorou, Michael K., Valentine, David L., O’Malley, Michelle A.
Publicado 2021

Anaerobic gut fungi are an untapped reservoir of natural products

por Swift, Candice L., Louie, Katherine B., Bowen, Benjamin P., Olson, Heather M., Purvine, Samuel O., Salamov, Asaf, Mondo, Stephen J., Solomon, Kevin V., Wright, Aaron T., Northen, Trent R., Grigoriev, Igor V., Keller, Nancy P., O’Malley, Michelle A.
Publicado 2021

Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

por Gilmore, Sean P., Henske, John K., Sexton, Jessica A., Solomon, Kevin V., Seppälä, Susanna, Yoo, Justin I, Huyett, Lauren M., Pressman, Abe, Cogan, James Z., Kivenson, Veronika, Peng, Xuefeng, Tan, YerPeng, Valentine, David L., O’Malley, Michelle A.
Publicado 2017