CODEX: a normalization and copy number variation detection method for whole exome sequencing

por Jiang, Yuchao, Oldridge, Derek A., Diskin, Sharon J., Zhang, Nancy R.
Publicado 2015

Optimizing copy number variation analysis using genome-wide short sequence oligonucleotide arrays

por Oldridge, Derek A., Banerjee, Samprit, Setlur, Sunita R., Sboner, Andrea, Demichelis, Francesca
Publicado 2010

Overview of methods for enhancing bone regeneration in distraction osteogenesis: Potential roles of biometals

por Li, Ye, Pan, Qi, Xu, Jiankun, He, Xuan, Li, Helen A., Oldridge, Derek A., Li, Gang, Qin, Ling
Publicado 2021

Correction: Targeting the mTOR Complex by Everolimus in NRAS Mutant Neuroblastoma

por Kiessling, Michael K., Curioni-Fontecedro, Alessandra, Samaras, Panagiotis, Lang, Silvia, Scharl, Michael, Aguzzi, Adriano, Oldridge, Derek A., Maris, John M., Rogler, Gerhard
Publicado 2017

Alpha-Fetoprotein-Producing Lung Hepatoid Adenocarcinoma with Brain Metastasis Treated with S-1

por Muroyama, Yuki, Tamiya, Hiroyuki, Tanaka, Goh, Tanaka, Wakae, Huang, Alexander C., Oldridge, Derek A., Matsusaka, Keisuke, Takazawa, Yutaka, Jo, Taisuke, Ushiku, Tetsuo, Nagase, Takahide
Publicado 2020

Common variants upstream of MLF1 at 3q25 and within CPZ at 4p16 associated with neuroblastoma

por McDaniel, Lee D., Conkrite, Karina L., Chang, Xiao, Capasso, Mario, Vaksman, Zalman, Oldridge, Derek A., Zachariou, Anna, Horn, Millicent, Diamond, Maura, Hou, Cuiping, Iolascon, Achille, Hakonarson, Hakon, Rahman, Nazneen, Devoto, Marcella, Diskin, Sharon J.
Publicado 2017

Genetic predisposition to neuroblastoma results from a regulatory polymorphism that promotes the adrenergic cell state

por Weichert-Leahey, Nina, Shi, Hui, Tao, Ting, Oldridge, Derek A., Durbin, Adam D., Abraham, Brian J., Zimmerman, Mark W., Zhu, Shizhen, Wood, Andrew C., Reyon, Deepak, Joung, J. Keith, Young, Richard A., Diskin, Sharon J., Maris, John M., Look, A. Thomas
Publicado 2023

Molecular Neuropathology in Practice: Clinical Profiling and Integrative Analysis of Molecular Alterations in Glioblastoma

por Nasrallah, MacLean P., Binder, Zev A., Oldridge, Derek A., Zhao, Jianhua, Lieberman, David B., Roth, Jacquelyn J., Watt, Christopher D., Sukhadia, Shrey, Klinman, Eva, Daber, Robert D., Desai, Arati, Brem, Steven, O’Rourke, Donald M., Morrissette, Jennifer J. D.
Publicado 2019

Cytomegalovirus Latent Infection is Associated with an Increased Risk of COVID-19-Related Hospitalization

por Alanio, Cécile, Verma, Anurag, Mathew, Divij, Gouma, Sigrid, Liang, Guanxiang, Dunn, Thomas, Oldridge, Derek A, Weaver, JoEllen, Kuri-Cervantes, Leticia, Pampena, M Betina, Betts, Michael R, Collman, Ronald G, Bushman, Frederic D, Meyer, Nuala J, Hensley, Scott E, Rader, Daniel, Wherry, E John
Publicado 2022

Proteomic profiling of MIS-C patients indicates heterogeneity relating to interferon gamma dysregulation and vascular endothelial dysfunction

por Diorio, Caroline, Shraim, Rawan, Vella, Laura A., Giles, Josephine R., Baxter, Amy E., Oldridge, Derek A., Canna, Scott W., Henrickson, Sarah E., McNerney, Kevin O., Balamuth, Frances, Burudpakdee, Chakkapong, Lee, Jessica, Leng, Tomas, Farrel, Alvin, Lambert, Michele P., Sullivan, Kathleen E., Wherry, E. John, Teachey, David T., Bassiri, Hamid, Behrens, Edward M.
Publicado 2021

Transcriptional immunogenomic analysis reveals distinct immunological clusters in paediatric nervous system tumours

por Nabbi, Arash, Beck, Pengbo, Delaidelli, Alberto, Oldridge, Derek A., Sudhaman, Sumedha, Zhu, Kelsey, Yang, S. Y. Cindy, Mulder, David T., Bruce, Jeffrey P., Paulson, Joseph N., Raman, Pichai, Zhu, Yuankun, Resnick, Adam C., Sorensen, Poul H., Sill, Martin, Brabetz, Sebastian, Lambo, Sander, Malkin, David, Johann, Pascal D., Kool, Marcel, Jones, David T. W., Pfister, Stefan M., Jäger, Natalie, Pugh, Trevor J.
Publicado 2023

Signatures of COVID-19 severity and immune response in the respiratory tract microbiome

por Merenstein, Carter, Liang, Guanxiang, Whiteside, Samantha A., Cobián-Güemes, Ana G., Merlino, Madeline S., Taylor, Louis J., Glascock, Abigail, Bittinger, Kyle, Tanes, Ceylan, Graham-Wooten, Jevon, Khatib, Layla A., Fitzgerald, Ayannah S., Reddy, Shantan, Baxter, Amy E., Giles, Josephine R., Oldridge, Derek A., Meyer, Nuala J., Wherry, E. John, McGinniss, John E., Bushman, Frederic D., Collman, Ronald G.
Publicado 2021

Signatures of COVID-19 Severity and Immune Response in the Respiratory Tract Microbiome

por Merenstein, Carter, Liang, Guanxiang, Whiteside, Samantha A., Cobián-Güemes, Ana G., Merlino, Madeline S., Taylor, Louis J., Glascock, Abigail, Bittinger, Kyle, Tanes, Ceylan, Graham-Wooten, Jevon, Khatib, Layla A., Fitzgerald, Ayannah S., Reddy, Shantan, Baxter, Amy E., Giles, Josephine R., Oldridge, Derek A., Meyer, Nuala J., Wherry, E. John, McGinniss, John E., Bushman, Frederic D., Collman, Ronald G.
Publicado 2021

IMMU-04. Transcriptional analysis reveals distinct microenvironmental subgroups across pediatric nervous system tumors

por Nabbi, Arash, Beck, Pengbo, Delaidelli, Alberto, Oldridge, Derek A, Sudhaman, Sumedha, Zhu, Kelsey, Yang, S Y Cindy, Mulder, David T, Bruce, Jeffrey P, Paulson, Joseph N, Raman, Pichai, Zhu, Yuankun, Silll, Martin, Brabetz, Sebastian, Lambo, Sander, Johann, Pascal D, Resnick, Adam C, Sorensen, Poul H, Malkin, David, Kool, Marcel, Jones, David T W, Pfister, Stefan M, Jäger, Natalie, Pugh, Trevor J
Publicado 2022

Correction for Merenstein et al., “Signatures of COVID-19 Severity and Immune Response in the Respiratory Tract Microbiome”

por Merenstein, Carter, Liang, Guanxiang, Whiteside, Samantha A., Cobián-Güemes, Ana G., Merlino, Madeline S., Taylor, Louis J., Glascock, Abigail, Bittinger, Kyle, Tanes, Ceylan, Graham-Wooten, Jevon, Khatib, Layla A., Fitzgerald, Ayannah S., Reddy, Shantan, Baxter, Amy E., Giles, Josephine R., Oldridge, Derek A., Meyer, Nuala J., Wherry, E. John, McGinniss, John E., Bushman, Frederic D., Collman, Ronald G.
Publicado 2022

Distinct antibody and memory B cell responses in SARS-CoV-2 naïve and recovered individuals following mRNA vaccination

por Goel, Rishi R., Apostolidis, Sokratis A., Painter, Mark M., Mathew, Divij, Pattekar, Ajinkya, Kuthuru, Oliva, Gouma, Sigrid, Hicks, Philip, Meng, Wenzhao, Rosenfeld, Aaron M., Dysinger, Sarah, Lundgreen, Kendall A., Kuri-Cervantes, Leticia, Adamski, Sharon, Hicks, Amanda, Korte, Scott, Oldridge, Derek A., Baxter, Amy E., Giles, Josephine R., Weirick, Madison E., McAllister, Christopher M., Dougherty, Jeanette, Long, Sherea, D’Andrea, Kurt, Hamilton, Jacob T., Betts, Michael R., Luning Prak, Eline T., Bates, Paul, Hensley, Scott E., Greenplate, Allison R., Wherry, E. John
Publicado 2021

Rapid induction of antigen-specific CD4(+) T cells is associated with coordinated humoral and cellular immunity to SARS-CoV-2 mRNA vaccination

por Painter, Mark M., Mathew, Divij, Goel, Rishi R., Apostolidis, Sokratis A., Pattekar, Ajinkya, Kuthuru, Oliva, Baxter, Amy E., Herati, Ramin S., Oldridge, Derek A., Gouma, Sigrid, Hicks, Philip, Dysinger, Sarah, Lundgreen, Kendall A., Kuri-Cervantes, Leticia, Adamski, Sharon, Hicks, Amanda, Korte, Scott, Giles, Josephine R., Weirick, Madison E., McAllister, Christopher M., Dougherty, Jeanette, Long, Sherea, D’Andrea, Kurt, Hamilton, Jacob T., Betts, Michael R., Bates, Paul, Hensley, Scott E., Grifoni, Alba, Weiskopf, Daniela, Sette, Alessandro, Greenplate, Allison R., Wherry, E. John
Publicado 2021

Seasonal human coronavirus antibodies are boosted upon SARS-CoV-2 infection but not associated with protection

por Anderson, Elizabeth M., Goodwin, Eileen C., Verma, Anurag, Arevalo, Claudia P., Bolton, Marcus J., Weirick, Madison E., Gouma, Sigrid, McAllister, Christopher M., Christensen, Shannon R., Weaver, JoEllen, Hicks, Phillip, Manzoni, Tomaz B., Oniyide, Oluwatosin, Ramage, Holly, Mathew, Divij, Baxter, Amy E., Oldridge, Derek A., Greenplate, Allison R., Wu, Jennifer E., Alanio, Cécile, D’Andrea, Kurt, Kuthuru, Oliva, Dougherty, Jeanette, Pattekar, Ajinkya, Kim, Justin, Han, Nicholas, Apostolidis, Sokratis A., Huang, Alex C., Vella, Laura A., Wherry, E. John, Meyer, Nuala J., Cherry, Sara, Bates, Paul, Rader, Daniel J., Hensley, Scott E.
Publicado 2020

Signaling through FcγRIIA and the C5a-C5aR pathway mediates platelet hyperactivation in COVID-19

por Apostolidis, Sokratis A., Sarkar, Amrita, Giannini, Heather M., Goel, Rishi R., Mathew, Divij, Suzuki, Aae, Baxter, Amy E., Greenplate, Allison R., Alanio, Cécile, Abdel-Hakeem, Mohamed, Oldridge, Derek A., Giles, Josephine, Wu, Jennifer E., Chen, Zeyu, Huang, Yinghui Jane, Pattekar, Ajinkya, Manne, Sasikanth, Kuthuru, Oliva, Dougherty, Jeanette, Weiderhold, Brittany, Weisman, Ariel R., Ittner, Caroline A. G., Gouma, Sigrid, Dunbar, Debora, Frank, Ian, Huang, Alexander C., Vella, Laura A., Reilly, John P., Hensley, Scott E., Rauova, Lubica, Zhao, Liang, Meyer, Nuala J., Poncz, Mortimer, Abrams, Charles S., Wherry, E. John
Publicado 2021

Efficient recall of Omicron-reactive B cell memory after a third dose of SARS-CoV-2 mRNA vaccine

por Goel, Rishi R., Painter, Mark M., Lundgreen, Kendall A., Apostolidis, Sokratis A., Baxter, Amy E., Giles, Josephine R., Mathew, Divij, Pattekar, Ajinkya, Reynaldi, Arnold, Khoury, David S., Gouma, Sigrid, Hicks, Philip, Dysinger, Sarah, Hicks, Amanda, Sharma, Harsh, Herring, Sarah, Korte, Scott, KC, Wumesh, Oldridge, Derek A., Erickson, Rachel I., Weirick, Madison E., McAllister, Christopher M., Awofolaju, Moses, Tanenbaum, Nicole, Dougherty, Jeanette, Long, Sherea, D’Andrea, Kurt, Hamilton, Jacob T., McLaughlin, Maura, Williams, Justine C., Adamski, Sharon, Kuthuru, Oliva, Drapeau, Elizabeth M., Davenport, Miles P., Hensley, Scott E., Bates, Paul, Greenplate, Allison R., Wherry, E. John
Publicado 2022