Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?

por Olshen, Adam B., Segal, Mark R.
Publicado 2023

A classification model for distinguishing copy number variants from cancer-related alterations

por Ostrovnaya, Irina, Nanjangud, Gouri, Olshen, Adam B
Publicado 2010

Pan-cancer identification of clinically relevant genomic subtypes using outcome-weighted integrative clustering

por Arora, Arshi, Olshen, Adam B., Seshan, Venkatraman E., Shen, Ronglai
Publicado 2020

Integrative Subtype Discovery in Glioblastoma Using iCluster

por Shen, Ronglai, Mo, Qianxing, Schultz, Nikolaus, Seshan, Venkatraman E., Olshen, Adam B., Huse, Jason, Ladanyi, Marc, Sander, Chris
Publicado 2012

Development and Validation of a Gene-Based Model for Outcome Prediction in Germ Cell Tumors Using a Combined Genomic and Expression Profiling Approach

por Korkola, James E., Heck, Sandy, Olshen, Adam B., Feldman, Darren R., Reuter, Victor E., Houldsworth, Jane, Bosl, George J., Chaganti, R. S. K.
Publicado 2015

Next-Generation Sequencing of Uveal Melanoma for Detection of Genetic Alterations Predicting Metastasis

por Afshar, Armin R., Damato, Bertil E., Stewart, Jay M., Zablotska, Lydia B., Roy, Ritu, Olshen, Adam B., Joseph, Nancy M., Bastian, Boris C.
Publicado 2019

Therapeutic implications of transcriptomics in head and neck cancer patient-derived xenografts

por Lee, Rex H., Roy, Ritu, Li, Hua, Hechmer, Aaron, Zhu, Tian Ran, Izgutdina, Adila, Olshen, Adam B., Johnson, Daniel E., Grandis, Jennifer R.
Publicado 2023

Changes in gene expression during the development of mammary tumors in MMTV-Wnt-1 transgenic mice

por Huang, Shixia, Li, Yi, Chen, Yidong, Podsypanina, Katrina, Chamorro, Mario, Olshen, Adam B, Desai, Kartiki V, Tann, Anne, Petersen, David, Green, Jeffrey E, Varmus, Harold E
Publicado 2005

COVIDNearTerm: A simple method to forecast COVID-19 hospitalizations

por Olshen, Adam B., Garcia, Ariadna, Kapphahn, Kristopher I., Weng, Yingjie, Vargo, Jason, Pugliese, John A., Crow, David, Wesson, Paul D., Rutherford, George W., Gonen, Mithat, Desai, Manisha
Publicado 2022

β1-integrin via NF-κB signaling is essential for acquisition of invasiveness in a model of radiation treated in situ breast cancer

por Nam, Jin-Min, Ahmed, Kazi M, Costes, Sylvain, Zhang, Hui, Onodera, Yasuhito, Olshen, Adam B, Hatanaka, Kanako C, Kinoshita, Rumiko, Ishikawa, Masayori, Sabe, Hisataka, Shirato, Hiroki, Park, Catherine C
Publicado 2013

Identifying recurrent mutations in cancer reveals widespread lineage diversity and mutational specificity

por Chang, Matthew T., Asthana, Saurabh, Gao, Sizhi Paul, Lee, Byron H., Chapman, Jocelyn S., Kandoth, Cyriac, Gao, JianJiong, Socci, Nicholas D., Solit, David B., Olshen, Adam B., Schultz, Nikolaus, Taylor, Barry S.
Publicado 2015

Copy number and gene expression differences between African American and Caucasian American prostate cancer

por Rose, Amy E, Satagopan, Jaya M, Oddoux, Carole, Zhou, Qin, Xu, Ruliang, Olshen, Adam B, Yu, Jessie Z, Dash, Atreya, Jean-Gilles, Jerome, Reuter, Victor, Gerald, William L, Lee, Peng, Osman, Iman
Publicado 2010

Changes in Abundance of Oral Microbiota Associated with Oral Cancer

por Schmidt, Brian L., Kuczynski, Justin, Bhattacharya, Aditi, Huey, Bing, Corby, Patricia M., Queiroz, Erica L. S., Nightingale, Kira, Kerr, A. Ross, DeLacure, Mark D., Veeramachaneni, Ratna, Olshen, Adam B., Albertson, Donna G.
Publicado 2014

Genome-wide DNA methylation is predictive of outcome in juvenile myelomonocytic leukemia

por Stieglitz, Elliot, Mazor, Tali, Olshen, Adam B., Geng, Huimin, Gelston, Laura C., Akutagawa, Jon, Lipka, Daniel B., Plass, Christoph, Flotho, Christian, Chehab, Farid F., Braun, Benjamin S., Costello, Joseph F., Loh, Mignon L.
Publicado 2017

Genetic Analysis of the Early Natural History of Epithelial Ovarian Carcinoma

por Pothuri, Bhavana, Leitao, Mario M., Levine, Douglas A., Viale, Agnès, Olshen, Adam B., Arroyo, Crispinita, Bogomolniy, Faina, Olvera, Narciso, Lin, Oscar, Soslow, Robert A., Robson, Mark E., Offit, Kenneth, Barakat, Richard R., Boyd, Jeff
Publicado 2010

Perturbations in common and distinct inflammatory pathways associated with morning and evening fatigue in outpatients receiving chemotherapy

por Kober, Kord M., Harris, Carolyn, Conley, Yvette P., Dhruva, Anand, Dokiparthi, Vasuda, Hammer, Marilyn J., Levine, Jon D., Oppegaard, Kate, Paul, Steven, Shin, Joosun, Sucher, Anatol, Wright, Fay, Yuen, Brian, Olshen, Adam B., Miaskowski, Christine
Publicado 2022

Ferrous iron–activatable drug conjugate achieves potent MAPK blockade in KRAS-driven tumors

por Jiang, Honglin, Muir, Ryan K., Gonciarz, Ryan L., Olshen, Adam B., Yeh, Iwei, Hann, Byron C., Zhao, Ning, Wang, Yung-hua, Behr, Spencer C., Korkola, James E., Evans, Michael J., Collisson, Eric A., Renslo, Adam R.
Publicado 2022

In utero and early-life exposure to thirdhand smoke causes profound changes to the immune system

por Snijders, Antoine M., Zhou, Mi, Whitehead, Todd P., Fitch, Briana, Pandey, Priyatama, Hechmer, Aaron, Huang, Abel, Schick, Suzaynn F., de Smith, Adam J., Olshen, Adam B., Metayer, Catherine, Mao, Jian-Hua, Wiemels, Joseph L., Kogan, Scott C.
Publicado 2021

Recurrent epimutations activate gene body promoters in primary glioblastoma

por Nagarajan, Raman P., Zhang, Bo, Bell, Robert J.A., Johnson, Brett E., Olshen, Adam B., Sundaram, Vasavi, Li, Daofeng, Graham, Ashley E., Diaz, Aaron, Fouse, Shaun D., Smirnov, Ivan, Song, Jun, Paris, Pamela L., Wang, Ting, Costello, Joseph F.
Publicado 2014

Venetoclax and dinaciclib elicit synergistic preclinical efficacy against hypodiploid acute lymphoblastic leukemia

por Pariury, Holly, Fandel, Joshua, Bachl, Stefanie, Ang, Kenny K., Markossian, Sarine, Wilson, Chris G., Braun, Benjamin S., Popescu, Bogdan, Wohlfeil, Margo, Beckman, Kyle, Xirenayi, Simayijiang, Roy, Ritu P., Olshen, Adam B., Smith, Catherine, Arkin, Michelle R., Loh, Mignon L., Diaz-Flores, Ernesto
Publicado 2023