Non-homologous isofunctional enzymes: A systematic analysis of alternative solutions in enzyme evolution

por Omelchenko, Marina V, Galperin, Michael Y, Wolf, Yuri I, Koonin, Eugene V
Publicado 2010

Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ

por Omelchenko, Marina V, Makarova, Kira S, Wolf, Yuri I, Rogozin, Igor B, Koonin, Eugene V
Publicado 2003

Bioinformatics and functional analysis define four distinct groups of AlkB DNA-dioxygenases in bacteria

por van den Born, Erwin, Bekkelund, Anders, Moen, Marivi N., Omelchenko, Marina V., Klungland, Arne, Falnes, Pål Ø.
Publicado 2009

Viral AlkB proteins repair RNA damage by oxidative demethylation

por van den Born, Erwin, Omelchenko, Marina V., Bekkelund, Anders, Leihne, Vibeke, Koonin, Eugene V., Dolja, Valerian V., Falnes, Pål Ø.
Publicado 2008

Comparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistance

por Omelchenko, Marina V, Wolf, Yuri I, Gaidamakova, Elena K, Matrosova, Vera Y, Vasilenko, Alexander, Zhai, Min, Daly, Michael J, Koonin, Eugene V, Makarova, Kira S
Publicado 2005

Evolution of AANAT: expansion of the gene family in the cephalochordate amphioxus

por Pavlicek, Jiri, Sauzet, Sandrine, Besseau, Laurence, Coon, Steven L, Weller, Joan L, Boeuf, Gilles, Gaildrat, Pascaline, Omelchenko, Marina V, Koonin, Eugene V, Falcón, Jack, Klein, David C
Publicado 2010

Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1

por Saw, Jimmy H, Mountain, Bruce W, Feng, Lu, Omelchenko, Marina V, Hou, Shaobin, Saito, Jennifer A, Stott, Matthew B, Li, Dan, Zhao, Guang, Wu, Junli, Galperin, Michael Y, Koonin, Eugene V, Makarova, Kira S, Wolf, Yuri I, Rigden, Daniel J, Dunfield, Peter F, Wang, Lei, Alam, Maqsudul
Publicado 2008

Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia

por Hou, Shaobin, Makarova, Kira S, Saw, Jimmy HW, Senin, Pavel, Ly, Benjamin V, Zhou, Zhemin, Ren, Yan, Wang, Jianmei, Galperin, Michael Y, Omelchenko, Marina V, Wolf, Yuri I, Yutin, Natalya, Koonin, Eugene V, Stott, Matthew B, Mountain, Bruce W, Crowe, Michelle A, Smirnova, Angela V, Dunfield, Peter F, Feng, Lu, Wang, Lei, Alam, Maqsudul
Publicado 2008

Deinococcus geothermalis: The Pool of Extreme Radiation Resistance Genes Shrinks

por Makarova, Kira S., Omelchenko, Marina V., Gaidamakova, Elena K., Matrosova, Vera Y., Vasilenko, Alexander, Zhai, Min, Lapidus, Alla, Copeland, Alex, Kim, Edwin, Land, Miriam, Mavromatis, Konstantinos, Pitluck, Samuel, Richardson, Paul M., Detter, Chris, Brettin, Thomas, Saunders, Elizabeth, Lai, Barry, Ravel, Bruce, Kemner, Kenneth M., Wolf, Yuri I., Sorokin, Alexander, Gerasimova, Anna V., Gelfand, Mikhail S., Fredrickson, James K., Koonin, Eugene V., Daly, Michael J.
Publicado 2007

CDD: a Conserved Domain Database for the functional annotation of proteins

por Marchler-Bauer, Aron, Lu, Shennan, Anderson, John B., Chitsaz, Farideh, Derbyshire, Myra K., DeWeese-Scott, Carol, Fong, Jessica H., Geer, Lewis Y., Geer, Renata C., Gonzales, Noreen R., Gwadz, Marc, Hurwitz, David I., Jackson, John D., Ke, Zhaoxi, Lanczycki, Christopher J., Lu, Fu, Marchler, Gabriele H., Mullokandov, Mikhail, Omelchenko, Marina V., Robertson, Cynthia L., Song, James S., Thanki, Narmada, Yamashita, Roxanne A., Zhang, Dachuan, Zhang, Naigong, Zheng, Chanjuan, Bryant, Stephen H.
Publicado 2011