Applications of Boolean modeling to study the dynamics of a complex disease and therapeutics responses

por Hemedan, Ahmed Abdelmonem, Schneider, Reinhard, Ostaszewski, Marek
Publicado 2023

Evolutionary Conservation and Network Structure Characterize Genes of Phenotypic Relevance for Mitosis in Human

por Ostaszewski, Marek, Eifes, Serge, del Sol, Antonio
Publicado 2012

MolArt: a molecular structure annotation and visualization tool

por Hoksza, David, Gawron, Piotr, Ostaszewski, Marek, Schneider, Reinhard
Publicado 2018

Exploration and comparison of molecular mechanisms across diseases using MINERVA Net

por Gawron, Piotr, Smula, Ewa, Schneider, Reinhard, Ostaszewski, Marek
Publicado 2023

Boolean modelling as a logic-based dynamic approach in systems medicine

por Hemedan, Ahmed Abdelmonem, Niarakis, Anna, Schneider, Reinhard, Ostaszewski, Marek
Publicado 2022

Clustering approaches for visual knowledge exploration in molecular interaction networks

por Ostaszewski, Marek, Kieffer, Emmanuel, Danoy, Grégoire, Schneider, Reinhard, Bouvry, Pascal
Publicado 2018

MINERVA API and plugins: opening molecular network analysis and visualization to the community

por Hoksza, David, Gawron, Piotr, Ostaszewski, Marek, Smula, Ewa, Schneider, Reinhard
Publicado 2019

Closing the gap between formats for storing layout information in systems biology

por Hoksza, David, Gawron, Piotr, Ostaszewski, Marek, Hasenauer, Jan, Schneider, Reinhard
Publicado 2019

Reusability and composability in process description maps: RAS–RAF–MEK–ERK signalling

por Mazein, Alexander, Rougny, Adrien, Karr, Jonathan R, Saez-Rodriguez, Julio, Ostaszewski, Marek, Schneider, Reinhard
Publicado 2021

Computational Systems Biology Approach for the Study of Rheumatoid Arthritis: From a Molecular Map to a Dynamical Model

por Singh, Vidisha, Ostaszewski, Marek, Kalliolias, George D., Chiocchia, Gilles, Olaso, Robert, Petit-Teixeira, Elisabeth, Helikar, Tomáš, Niarakis, Anna
Publicado 2017

Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases

por Satagopam, Venkata, Gu, Wei, Eifes, Serge, Gawron, Piotr, Ostaszewski, Marek, Gebel, Stephan, Barbosa-Silva, Adriano, Balling, Rudi, Schneider, Reinhard
Publicado 2016

RA-map: building a state-of-the-art interactive knowledge base for rheumatoid arthritis

por Singh, Vidisha, Kalliolias, George D, Ostaszewski, Marek, Veyssiere, Maëva, Pilalis, Eleftherios, Gawron, Piotr, Mazein, Alexander, Bonnet, Eric, Petit-Teixeira, Elisabeth, Niarakis, Anna
Publicado 2020

CyFi-MAP: an interactive pathway-based resource for cystic fibrosis

por Pereira, Catarina, Mazein, Alexander, Farinha, Carlos M., Gray, Michael A., Kunzelmann, Karl, Ostaszewski, Marek, Balaur, Irina, Amaral, Margarida D., Falcao, Andre O.
Publicado 2021

MINERVA—a platform for visualization and curation of molecular interaction networks

por Gawron, Piotr, Ostaszewski, Marek, Satagopam, Venkata, Gebel, Stephan, Mazein, Alexander, Kuzma, Michal, Zorzan, Simone, McGee, Fintan, Otjacques, Benoît, Balling, Rudi, Schneider, Reinhard
Publicado 2016

Mechanistic modeling of the SARS-CoV-2 disease map

por Rian, Kinza, Esteban-Medina, Marina, Hidalgo, Marta R., Çubuk, Cankut, Falco, Matias M., Loucera, Carlos, Gunyel, Devrim, Ostaszewski, Marek, Peña-Chilet, María, Dopazo, Joaquín
Publicado 2021

Platelet mitochondrial membrane potential in Parkinson's disease

por Antony, Paul M A, Boyd, Olga, Trefois, Christophe, Ammerlaan, Wim, Ostaszewski, Marek, Baumuratov, Aidos S, Longhino, Laura, Antunes, Laurent, Koopman, Werner, Balling, Rudi, Diederich, Nico J
Publicado 2015

Prediction of the Vaccine-derived Poliovirus Outbreak Incidence: A Hybrid Machine Learning Approach

por Hemedan, Ahmed A., Abd Elaziz, Mohamed, Jiao, Pengcheng, Alavi, Amir H., Bahgat, Mahmoud, Ostaszewski, Marek, Schneider, Reinhard, Ghazy, Haneen A., Ewees, Ahmed A., Lu, Songfeng
Publicado 2020

Author Correction: Prediction of the Vaccine-derived Poliovirus Outbreak Incidence: A Hybrid Machine Learning Approach

por Hemedan, Ahmed A., Elaziz, Mohamed Abd, Jiao, Pengcheng, Alavi, Amir H., Bahgat, Mahmoud, Ostaszewski, Marek, Schneider, Reinhard, Ghazy, Haneen A., Ewees, Ahmed A., Lu, Songfeng
Publicado 2020

A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance

por Mazein, Alexander, Acencio, Marcio Luis, Balaur, Irina, Rougny, Adrien, Welter, Danielle, Niarakis, Anna, Ramirez Ardila, Diana, Dogrusoz, Ugur, Gawron, Piotr, Satagopam, Venkata, Gu, Wei, Kremer, Andreas, Schneider, Reinhard, Ostaszewski, Marek
Publicado 2023

The SYSCID map: a graphical and computational resource of molecular mechanisms across rheumatoid arthritis, systemic lupus erythematosus and inflammatory bowel disease

por Acencio, Marcio Luis, Ostaszewski, Marek, Mazein, Alexander, Rosenstiel, Philip, Aden, Konrad, Mishra, Neha, Andersen, Vibeke, Sidiropoulos, Prodromos, Banos, Aggelos, Filia, Anastasia, Rahmouni, Souad, Finckh, Axel, Gu, Wei, Schneider, Reinhard, Satagopam, Venkata
Publicado 2023