Methods and Developments in Graphical Pangenomics

por Outten, Joseph, Warren, Andrew
Publicado 2021

Potential impact of annual vaccination with reformulated COVID-19 vaccines: lessons from the U.S. COVID-19 Scenario Modeling Hub

por Jung, Sung-mok, Loo, Sara L., Howerton, Emily, Contamin, Lucie, Smith, Claire P., Carcelén, Erica C., Yan, Katie, Bents, Samantha J., Levander, John, Espino, Jessi, Lemaitre, Joseph C., Sato, Koji, McKee, Clif D., Hill, Alison L., Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Vespignani, Alessandro, Rosenstrom, Erik T., Rodriguez-Cartes, Sebastian A., Ivy, Julie S., Mayorga, Maria E., Swann, Julie L., España, Guido, Cavany, Sean, Moore, Sean M., Perkins, Alex, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Srivastava, Ajitesh, Al Aawar, Majd, Bi, Kaiming, Bandekar, Shraddha Ramdas, Bouchnita, Anass, Fox, Spencer J., Meyers, Lauren Ancel, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Hurt, Benjamin, Klahn, Brian, Outten, Joseph, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Vullikanti, Anil, Lewis, Bryan, Marathe, Madhav, Hochheiser, Harry, Runge, Michael C., Shea, Katriona, Truelove, Shaun, Viboud, Cécile, Lessler, Justin
Publicado 2023

Modeling of Future COVID-19 Cases, Hospitalizations, and Deaths, by Vaccination Rates and Nonpharmaceutical Intervention Scenarios — United States, April–September 2021

por Borchering, Rebecca K., Viboud, Cécile, Howerton, Emily, Smith, Claire P., Truelove, Shaun, Runge, Michael C., Reich, Nicholas G., Contamin, Lucie, Levander, John, Salerno, Jessica, van Panhuis, Wilbert, Kinsey, Matt, Tallaksen, Kate, Obrecht, R. Freddy, Asher, Laura, Costello, Cash, Kelbaugh, Michael, Wilson, Shelby, Shin, Lauren, Gallagher, Molly E., Mullany, Luke C., Rainwater-Lovett, Kaitlin, Lemaitre, Joseph C., Dent, Juan, Grantz, Kyra H., Kaminsky, Joshua, Lauer, Stephen A., Lee, Elizabeth C., Meredith, Hannah R., Perez-Saez, Javier, Keegan, Lindsay T., Karlen, Dean, Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Pastore y Piontti, Ana, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srinivasan, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Schlitt, James, Corbett, Patrick, Telionis, Pyrros Alexander, Wang, Lijing, Peddireddy, Akhil Sai, Hurt, Benjamin, Chen, Jiangzhuo, Vullikanti, Anil, Marathe, Madhav, Healy, Jessica M., Slayton, Rachel B., Biggerstaff, Matthew, Johansson, Michael A., Shea, Katriona, Lessler, Justin
Publicado 2021

Impact of SARS-CoV-2 vaccination of children ages 5–11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021-March 2022: a multi-model...

por Borchering, Rebecca K., Mullany, Luke C., Howerton, Emily, Chinazzi, Matteo, Smith, Claire P., Qin, Michelle, Reich, Nicholas G., Contamin, Lucie, Levander, John, Kerr, Jessica, Espino, J, Hochheiser, Harry, Lovett, Kaitlin, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Lemaitre, Joseph C., Hulse, Juan Dent, Kaminsky, Joshua, Lee, Elizabeth C., Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Piontti, Ana Pastore y, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Hurt, Benjamin, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Galanti, Marta, Yamana, Teresa, Pei, Sen, Shaman, Jeffrey, Espana, Guido, Cavany, Sean, Moore, Sean, Perkins, Alex, Healy, Jessica M., Slayton, Rachel B., Johansson, Michael A., Biggerstaff, Matthew, Shea, Katriona, Truelove, Shaun A., Runge, Michael C., Viboud, Cécile, Lessler, Justin
Publicado 2022

Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination

por Truelove, Shaun, Smith, Claire P, Qin, Michelle, Mullany, Luke C, Borchering, Rebecca K, Lessler, Justin, Shea, Katriona, Howerton, Emily, Contamin, Lucie, Levander, John, Kerr, Jessica, Hochheiser, Harry, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Rainwater-Lovett, Kaitlin, Lemairtre, Joseph C, Dent, Juan, Kaminsky, Joshua, Lee, Elizabeth C, Perez-Saez, Javier, Hill, Alison, Karlen, Dean, Chinazzi, Matteo, Davis, Jessica T, Mu, Kunpeng, Xiong, Xinyue, Pastore y Piontti, Ana, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srinivasan, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Orr, Mark, Harrison, Galen, Hurt, Benjamin, Chen, Jiangzhuo, Vullikanti, Anil, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Galanti, Marta, Yamana, Teresa K, Pei, Sen, Shaman, Jeffrey L, Healy, Jessica M, Slayton, Rachel B, Biggerstaff, Matthew, Johansson, Michael A, Runge, Michael C, Viboud, Cecile
Publicado 2022

Impact of SARS-CoV-2 vaccination of children ages 5–11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021–March 2022: a multi-model...

por Borchering, Rebecca K., Mullany, Luke C., Howerton, Emily, Chinazzi, Matteo, Smith, Claire P., Qin, Michelle, Reich, Nicholas G., Contamin, Lucie, Levander, John, Kerr, Jessica, Espino, J., Hochheiser, Harry, Lovett, Kaitlin, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Lemaitre, Joseph C., Hulse, Juan Dent, Kaminsky, Joshua, Lee, Elizabeth C., Hill, Alison L., Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Pastore y Piontti, Ana, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Hurt, Benjamin, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Galanti, Marta, Yamana, Teresa, Pei, Sen, Shaman, Jeffrey, España, Guido, Cavany, Sean, Moore, Sean, Perkins, Alex, Healy, Jessica M., Slayton, Rachel B., Johansson, Michael A., Biggerstaff, Matthew, Shea, Katriona, Truelove, Shaun A., Runge, Michael C., Viboud, Cécile, Lessler, Justin
Publicado 2022

Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination

por Truelove, Shaun, Smith, Claire P., Qin, Michelle, Mullany, Luke C., Borchering, Rebecca K., Lessler, Justin, Shea, Katriona, Howerton, Emily, Contamin, Lucie, Levander, John, Salerno, Jessica, Hochheiser, Harry, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Rainwater-Lovett, Kaitlin, Lemaitre, Joseph C., Dent, Juan, Kaminsky, Joshua, Lee, Elizabeth C., Perez-Saez, Javier, Hill, Alison, Karlen, Dean, Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Piontti, Ana Pastore y, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srinivasan, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Schlitt, James, Corbett, Patrick, Telionis, Pyrros Alexander, Wang, Lijing, Peddireddy, Akhil Sai, Hurt, Benjamin, Chen, Jiangzhuo, Vullikanti, Anil, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Galanti, Marta, Yamana, Teresa, Pei, Sen, Shaman, Jeffrey, Reich, Nicholas G., Healy, Jessica M., Slayton, Rachel B., Biggerstaff, Matthew, Johansson, Michael A., Runge, Michael C., Viboud, Cécile
Publicado 2021

Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource

por Kapun, Martin, Nunez, Joaquin C B, Bogaerts-Márquez, María, Murga-Moreno, Jesús, Paris, Margot, Outten, Joseph, Coronado-Zamora, Marta, Tern, Courtney, Rota-Stabelli, Omar, Guerreiro, Maria P García, Casillas, Sònia, Orengo, Dorcas J, Puerma, Eva, Kankare, Maaria, Ometto, Lino, Loeschcke, Volker, Onder, Banu S, Abbott, Jessica K, Schaeffer, Stephen W, Rajpurohit, Subhash, Behrman, Emily L, Schou, Mads F, Merritt, Thomas J S, Lazzaro, Brian P, Glaser-Schmitt, Amanda, Argyridou, Eliza, Staubach, Fabian, Wang, Yun, Tauber, Eran, Serga, Svitlana V, Fabian, Daniel K, Dyer, Kelly A, Wheat, Christopher W, Parsch, John, Grath, Sonja, Veselinovic, Marija Savic, Stamenkovic-Radak, Marina, Jelic, Mihailo, Buendía-Ruíz, Antonio J, Gómez-Julián, Maria Josefa, Espinosa-Jimenez, Maria Luisa, Gallardo-Jiménez, Francisco D, Patenkovic, Aleksandra, Eric, Katarina, Tanaskovic, Marija, Ullastres, Anna, Guio, Lain, Merenciano, Miriam, Guirao-Rico, Sara, Horváth, Vivien, Obbard, Darren J, Pasyukova, Elena, Alatortsev, Vladimir E, Vieira, Cristina P, Vieira, Jorge, Torres, Jorge Roberto, Kozeretska, Iryna, Maistrenko, Oleksandr M, Montchamp-Moreau, Catherine, Mukha, Dmitry V, Machado, Heather E, Lamb, Keric, Paulo, Tânia, Yusuf, Leeban, Barbadilla, Antonio, Petrov, Dmitri, Schmidt, Paul, Gonzalez, Josefa, Flatt, Thomas, Bergland, Alan O
Publicado 2021

Informing pandemic response in the face of uncertainty. An evaluation of the U.S. COVID-19 Scenario Modeling Hub

por Howerton, Emily, Contamin, Lucie, Mullany, Luke C, Qin, Michelle, Reich, Nicholas G., Bents, Samantha, Borchering, Rebecca K., Jung, Sung-mok, Loo, Sara L., Smith, Claire P., Levander, John, Kerr, Jessica, Espino, J., van Panhuis, Willem G., Hochheiser, Harry, Galanti, Marta, Yamana, Teresa, Pei, Sen, Shaman, Jeffrey, Rainwater-Lovett, Kaitlin, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Lemaitre, Joseph C., Kaminsky, Joshua, Hulse, Juan Dent, Lee, Elizabeth C., McKee, Clif, Hill, Alison, Karlen, Dean, Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Piontti, Ana Pastore y, Vespignani, Alessandro, Rosenstrom, Erik T., Ivy, Julie S., Mayorga, Maria E., Swann, Julie L., España, Guido, Cavany, Sean, Moore, Sean, Perkins, Alex, Hladish, Thomas, Pillai, Alexander, Toh, Kok Ben, Longini, Ira, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Bouchnita, Anass, Bi, Kaiming, Lachmann, Michael, Fox, Spencer, Meyers, Lauren Ancel, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Hurt, Benjamin, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Cadwell, Betsy L., Healy, Jessica M., Slayton, Rachel B., Johansson, Michael A., Biggerstaff, Matthew, Truelove, Shaun, Runge, Michael C., Shea, Katriona, Viboud, Cécile, Lessler, Justin
Publicado 2023

Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty

por Howerton, Emily, Contamin, Lucie, Mullany, Luke C., Qin, Michelle, Reich, Nicholas G., Bents, Samantha, Borchering, Rebecca K., Jung, Sung-mok, Loo, Sara L., Smith, Claire P., Levander, John, Kerr, Jessica, Espino, J., van Panhuis, Willem G., Hochheiser, Harry, Galanti, Marta, Yamana, Teresa, Pei, Sen, Shaman, Jeffrey, Rainwater-Lovett, Kaitlin, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Lemaitre, Joseph C., Kaminsky, Joshua, Hulse, Juan Dent, Lee, Elizabeth C., McKee, Clifton D., Hill, Alison, Karlen, Dean, Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Pastore y Piontti, Ana, Vespignani, Alessandro, Rosenstrom, Erik T., Ivy, Julie S., Mayorga, Maria E., Swann, Julie L., España, Guido, Cavany, Sean, Moore, Sean, Perkins, Alex, Hladish, Thomas, Pillai, Alexander, Ben Toh, Kok, Longini, Ira, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Bouchnita, Anass, Bi, Kaiming, Lachmann, Michael, Fox, Spencer J., Meyers, Lauren Ancel, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Hurt, Benjamin, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Cadwell, Betsy L., Healy, Jessica M., Slayton, Rachel B., Johansson, Michael A., Biggerstaff, Matthew, Truelove, Shaun, Runge, Michael C., Shea, Katriona, Viboud, Cécile, Lessler, Justin
Publicado 2023