Pseudoscorpion mitochondria show rearranged genes and genome-wide reductions of RNA gene sizes and inferred structures, yet typical nucleotide composition bias

por Ovchinnikov, Sergey, Masta, Susan E
Publicado 2012

Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information

por Ovchinnikov, Sergey, Kamisetty, Hetunandan, Baker, David
Publicado 2014

Applications of contact predictions to structural biology

por Simkovic, Felix, Ovchinnikov, Sergey, Baker, David, Rigden, Daniel J.
Publicado 2017

Magnetic Collapse in Fe(3)Se(4) under High Pressure

por Begunovich, Lyudmila V., Korshunov, Maxim M., Ovchinnikov, Sergey G.
Publicado 2022

ColabFold: making protein folding accessible to all

por Mirdita, Milot, Schütze, Konstantin, Moriwaki, Yoshitaka, Heo, Lim, Ovchinnikov, Sergey, Steinegger, Martin
Publicado 2022

One- and Two-Particle Correlation Functions in the Cluster Perturbation Theory for Cuprates

por Kuz’min, Valerii I., Nikolaev, Sergey V., Korshunov, Maxim M., Ovchinnikov, Sergey G.
Publicado 2023

Theoretical Investigation of the Prospect to Tailor ZnO Electronic Properties with VP Thin Films

por Kholtobina, Anastasiia S., Kovaleva, Evgenia A., Melchakova, Julia, Ovchinnikov, Sergey G., Kuzubov, Alexander A.
Publicado 2021

Effect of Oxygen Nonstoichiometry on Electrical Conductivity and Thermopower of Gd(0.2)Sr(0.8)FeO(3−δ) Ferrite Samples

por Dudnikov, Vyacheslav, Orlov, Yury, Fedorov, Aleksandr, Solovyov, Leonid, Vereshchagin, Sergey, Burkov, Alexander, Novikov, Sergey, Ovchinnikov, Sergey
Publicado 2018

Interpreting Potts and Transformer Protein Models Through the Lens of Simplified Attention

por Bhattacharya, Nicholas, Thomas, Neil, Rao, Roshan, Dauparas, Justas, Koo, Peter K., Baker, David, Song, Yun S., Ovchinnikov, Sergey
Publicado 2022

Electronic Structure and Minimal Models for Flat and Corrugated CuO Monolayers: An Ab Initio Study

por Slobodchikov, Anatoly A., Nekrasov, Igor A., Begunovich, Lyudmila V., Makarov, Ilya A., Korshunov, Maxim M., Ovchinnikov, Sergey G.
Publicado 2023

End-to-end learning of multiple sequence alignments with differentiable Smith–Waterman

por Petti, Samantha, Bhattacharya, Nicholas, Rao, Roshan, Dauparas, Justas, Thomas, Neil, Zhou, Juannan, Rush, Alexander M, Koo, Peter, Ovchinnikov, Sergey
Publicado 2022

Large-scale determination of previously unsolved protein structures using evolutionary information

por Ovchinnikov, Sergey, Kinch, Lisa, Park, Hahnbeom, Liao, Yuxing, Pei, Jimin, Kim, David E, Kamisetty, Hetunandan, Grishin, Nick V, Baker, David
Publicado 2015

Mega-scale experimental analysis of protein folding stability in biology and design

por Tsuboyama, Kotaro, Dauparas, Justas, Chen, Jonathan, Laine, Elodie, Mohseni Behbahani, Yasser, Weinstein, Jonathan J., Mangan, Niall M., Ovchinnikov, Sergey, Rocklin, Gabriel J.
Publicado 2023

Protein sequence design by conformational landscape optimization

por Norn, Christoffer, Wicky, Basile I. M., Juergens, David, Liu, Sirui, Kim, David, Tischer, Doug, Koepnick, Brian, Anishchenko, Ivan, Baker, David, Ovchinnikov, Sergey
Publicado 2021

Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3

por Schoebel, Stefan, Mi, Wei, Stein, Alexander, Ovchinnikov, Sergey, Pavlovicz, Ryan, DiMaio, Frank, Baker, David, Chambers, Melissa G., Su, Huayou, Li, Dongsheng, Rapoport, Tom A., Liao, Maofu
Publicado 2017

Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters

por Baltoumas, Fotis A., Karatzas, Evangelos, Paez-Espino, David, Venetsianou, Nefeli K., Aplakidou, Eleni, Oulas, Anastasis, Finn, Robert D., Ovchinnikov, Sergey, Pafilis, Evangelos, Kyrpides, Nikos C., Pavlopoulos, Georgios A.
Publicado 2023

Cyclic peptide structure prediction and design using AlphaFold

por Rettie, Stephen A., Campbell, Katelyn V., Bera, Asim K., Kang, Alex, Kozlov, Simon, De La Cruz, Joshmyn, Adebomi, Victor, Zhou, Guangfeng, DiMaio, Frank, Ovchinnikov, Sergey, Bhardwaj, Gaurav
Publicado 2023

Effect of Multiplicity Fluctuation in Cobalt Ions on Crystal Structure, Magnetic and Electrical Properties of NdCoO(3) and SmCoO(3)

por Dudnikov, Vyacheslav A., Orlov, Yuri S., Solovyov, Leonid A., Vereshchagin, Sergey N., Gavrilkin, Sergey Yu., Tsvetkov, Alexey Yu., Velikanov, Dmitriy A., Gorev, Michael V., Novikov, Sergey V., Ovchinnikov, Sergey G.
Publicado 2020

Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation

por Cooper, Connor J., Zheng, Kaiyuan, Rush, Katherine W., Johs, Alexander, Sanders, Brian C., Pavlopoulos, Georgios A., Kyrpides, Nikos C., Podar, Mircea, Ovchinnikov, Sergey, Ragsdale, Stephen W., Parks, Jerry M.
Publicado 2020

Development of a dual-functional conjugate of antigenic peptide and Fc-III mimetics (DCAF) for targeted antibody blocking

por Zhang, Lin, Shen, Hao, Gong, Yiyi, Pang, Xiaojing, Yi, Meiqi, Guo, Lin, Li, Jin, Arroyo, Sam, Lu, Xin, Ovchinnikov, Sergey, Cheng, Gong, Liu, Xudong, Jiang, Xu, Feng, Shan, Deng, Haiteng
Publicado 2019