MAVL/StickWRLD: analyzing structural constraints using interpositional dependencies in biomolecular sequence alignments

por Ozer, Hatice Gulcin, Ray, William C.
Publicado 2006

DFI: gene feature discovery in RNA-seq experiments from multiple sources

por Ozer, Hatice Gulcin, Parvin, Jeffrey D, Huang, Kun
Publicado 2012

Effects of DNA topoisomerase IIα splice variants on acquired drug resistance

por Elton, Terry S., Ozer, Hatice Gulcin, Yalowich, Jack C.
Publicado 2020

The Importance of Weakly Co-Evolving Residue Networks in Proteins is Revealed by Visual Analytics

por Mohan, Sidharth, Ozer, Hatice Gulcin, Ray, William C.
Publicado 2022

Role of ChIP-seq in the discovery of transcription factor binding sites, differential gene regulation mechanism, epigenetic marks and beyond

por Mundade, Rasika, Ozer, Hatice Gulcin, Wei, Han, Prabhu, Lakshmi, Lu, Tao
Publicado 2014

BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation

por Gadepalli, Venkat Sundar, Ozer, Hatice Gulcin, Yilmaz, Ayse Selen, Pietrzak, Maciej, Webb, Amy
Publicado 2019

From Sequencer to Supercomputer: An Automatic Pipeline for Managing and Processing Next Generation Sequencing Data

por Camerlengo, Terry, Ozer, Hatice Gulcin, Onti-Srinivasan, Raghuram, Yan, Pearlly, Huang, Tim, Parvin, Jeffrey, Huang, Kun
Publicado 2012

Identification of Medium-Sized Copy Number Alterations in Whole-Genome Sequencing

por Ozer, Hatice Gulcin, Usubalieva, Aisulu, Dorrance, Adrienne, Yilmaz, Ayse Selen, Caligiuri, Michael, Marcucci, Guido, Huang, Kun
Publicado 2015

Whole-exome tumor sequencing study in biliary cancer patients with a response to MEK inhibitors

por Ahn, Daniel H., Ozer, Hatice Gulcin, Hancioglu, Baris, Lesinski, Gregory B., Timmers, Cynthia, Bekaii-Saab, Tanios
Publicado 2015

A hierarchical and collaborative BRD4/CEBPD partnership governs vascular smooth muscle cell inflammation

por Wang, Qingwei, Ozer, Hatice Gulcin, Wang, Bowen, Zhang, Mengxue, Urabe, Go, Huang, Yitao, Kent, K. Craig, Guo, Lian-Wang
Publicado 2021

Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia

por Zhang, Jie, Xiang, Yang, Ding, Liya, Keen-Circle, Kristin, Borlawsky, Tara B, Ozer, Hatice Gulcin, Jin, Ruoming, Payne, Philip, Huang, Kun
Publicado 2010

Angioplasty induces epigenomic remodeling in injured arteries

por Zhang, Mengxue, Urabe, Go, Ozer, Hatice Gulcin, Xie, Xiujie, Webb, Amy, Shirasu, Takuro, Li, Jing, Han, Renzhi, Kent, K Craig, Wang, Bowen, Guo, Lian-Wang
Publicado 2022

HDAC1 regulates the chromatin landscape to control transcriptional dependencies in chronic lymphocytic leukemia

por Lai, Tzung-Huei, Ozer, Hatice Gulcin, Gasparini, Pierluigi, Nigita, Giovanni, Distefano, Rosario, Yu, Lianbo, Ravikrishnan, Janani, Yilmaz, Selen, Gallegos, Juan, Shukla, Sachet, Puduvalli, Vinay, Woyach, Jennifer, Lapalombella, Rosa, Blachly, James, Byrd, John C., Sampath, Deepa
Publicado 2022

Targeting BRD4 in acute myeloid leukemia with partial tandem duplication of the MLL gene

por Bill, Marius, Goda, Chinmayee, Pepe, Felice, Ozer, Hatice Gulcin, McNeil, Betina, Zhang, Xiaoli, Karunasiri, Malith, Kulkarni, Rohan, Kalyan, Sonu, Papaioannou, Dimitrios, Ferenchak, Gregory, Garzon, Ramiro, Bradner, James E., Marcucci, Guido, Caligiuri, Michael A., Dorrance, Adrienne M.
Publicado 2021

Molecular, clinical, and prognostic implications of PTPN11 mutations in acute myeloid leukemia

por Fobare, Sydney, Kohlschmidt, Jessica, Ozer, Hatice Gulcin, Mrózek, Krzysztof, Nicolet, Deedra, Mims, Alice S., Garzon, Ramiro, Blachly, James S., Orwick, Shelley, Carroll, Andrew J., Stone, Richard M., Wang, Eunice S., Kolitz, Jonathan E., Powell, Bayard L., Oakes, Christopher C., Eisfeld, Ann-Kathrin, Hertlein, Erin, Byrd, John C.
Publicado 2022

Follicular Helper and Regulatory T Cells Drive the Development of Spontaneous Epstein–Barr Virus Lymphoproliferative Disorder

por Ahmed, Elshafa Hassan, Lustberg, Mark, Hale, Claire, Sloan, Shelby, Mao, Charlene, Zhang, Xiaoli, Ozer, Hatice Gulcin, Schlotter, Sarah, Smith, Porsha L., Jeney, Frankie, Chan, Wing Keung, Harrington, Bonnie K., Weigel, Christoph, Brooks, Eric, Klimaszewski, Haley L., Oakes, Christopher C., Abebe, Tamrat, Ibrahim, Muntaser E., Alinari, Lapo, Behbehani, Gregory K., Shindiapina, Polina, Caligiuri, Michael A., Baiocchi, Robert A.
Publicado 2023

Rare t(X;14)(q28;q32) translocation reveals link between MTCP1 and chronic lymphocytic leukemia

por Walker, Janek S., Hing, Zachary A., Sher, Steven, Cronin, James, Williams, Katie, Harrington, Bonnie, Skinner, Jordan N., Cempre, Casey B., Gregory, Charles T., Pan, Alexander, Yano, Max, Beaver, Larry P., Walker, Brandi R., Labanowska, Jadwiga M., Heerema, Nyla A., Mrózek, Krzysztof, Woyach, Jennifer A., Ruppert, Amy S., Lehman, Amy, Ozer, Hatice Gulcin, Coppola, Vincenzo, Yan, Pearlly, Byrd, John C., Blachly, James S., Lapalombella, Rosa
Publicado 2021

Recurrent XPO1 mutations alter pathogenesis of chronic lymphocytic leukemia

por Walker, Janek S., Hing, Zachary A., Harrington, Bonnie, Baumhardt, Jordan, Ozer, Hatice Gulcin, Lehman, Amy, Giacopelli, Brian, Beaver, Larry, Williams, Katie, Skinner, Jordan N., Cempre, Casey B., Sun, Qingxiang, Shacham, Sharon, Stromberg, Benjamin R., Summers, Matthew K., Abruzzo, Lynne V., Rassenti, Laura, Kipps, Thomas J., Parikh, Sameer, Kay, Neil E., Rogers, Kerry A., Woyach, Jennifer A., Coppola, Vincenzo, Chook, Yuh Min, Oakes, Christopher, Byrd, John C., Lapalombella, Rosa
Publicado 2021