Non-Redundant tRNA Reference Sequences for Deep Sequencing Analysis of tRNA Abundance and Epitranscriptomic RNA Modifications

por PICHOT, Florian, MARCHAND, Virginie, HELM, Mark, MOTORIN, Yuri
Publicado 2021

Holistic Optimization of Bioinformatic Analysis Pipeline for Detection and Quantification of 2′-O-Methylations in RNA by RiboMethSeq

por Pichot, Florian, Marchand, Virginie, Ayadi, Lilia, Bourguignon-Igel, Valérie, Helm, Mark, Motorin, Yuri
Publicado 2020

Next-Generation Sequencing-Based RiboMethSeq Protocol for Analysis of tRNA 2′-O-Methylation

por Marchand, Virginie, Pichot, Florian, Thüring, Kathrin, Ayadi, Lilia, Freund, Isabel, Dalpke, Alexander, Helm, Mark, Motorin, Yuri
Publicado 2017

HydraPsiSeq: a method for systematic and quantitative mapping of pseudouridines in RNA

por Marchand, Virginie, Pichot, Florian, Neybecker, Paul, Ayadi, Lilia, Bourguignon-Igel, Valérie, Wacheul, Ludivine, Lafontaine, Denis L J, Pinzano, Astrid, Helm, Mark, Motorin, Yuri
Publicado 2020

Quantification of substoichiometric modification reveals global tsRNA hypomodification, preferences for angiogenin-mediated tRNA cleavage, and idiosyncratic epitranscriptomes of hu...

por Pichot, Florian, Hogg, Marion C., Marchand, Virginie, Bourguignon, Valérie, Jirström, Elisabeth, Farrell, Cliona, Gibriel, Hesham A., Prehn, Jochen H.M., Motorin, Yuri, Helm, Mark
Publicado 2022

2′-O-methylation within prokaryotic and eukaryotic tRNA inhibits innate immune activation by endosomal Toll-like receptors but does not affect recognition of whole organisms

por Freund, Isabel, Buhl, Daniel K., Boutin, Sébastien, Kotter, Annika, Pichot, Florian, Marchand, Virginie, Vierbuchen, Tim, Heine, Holger, Motorin, Yuri, Helm, Mark, Dalpke, Alexander H., Eigenbrod, Tatjana
Publicado 2019

NOseq: amplicon sequencing evaluation method for RNA m(6)A sites after chemical deamination

por Werner, Stephan, Galliot, Aurellia, Pichot, Florian, Kemmer, Thomas, Marchand, Virginie, Sednev, Maksim V, Lence, Tina, Roignant, Jean-Yves, König, Julian, Höbartner, Claudia, Motorin, Yuri, Hildebrandt, Andreas, Helm, Mark
Publicado 2020