FuGePrior: A novel gene fusion prioritization algorithm based on accurate fusion structure analysis in cancer RNA-seq samples

por Paciello, Giulia, Ficarra, Elisa
Publicado 2017

isomiR-SEA: an RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation

por Urgese, Gianvito, Paciello, Giulia, Acquaviva, Andrea, Ficarra, Elisa
Publicado 2016

VDJSeq-Solver: In Silico V(D)J Recombination Detection Tool

por Paciello, Giulia, Acquaviva, Andrea, Pighi, Chiara, Ferrarini, Alberto, Macii, Enrico, Zamo’, Alberto, Ficarra, Elisa
Publicado 2015

FUNGI: FUsioN Gene Integration toolset

por Cervera, Alejandra, Rausio, Heidi, Kähkönen, Tiia, Andersson, Noora, Partel, Gabriele, Rantanen, Ville, Paciello, Giulia, Ficarra, Elisa, Hynninen, Johanna, Hietanen, Sakari, Carpén, Olli, Lehtonen, Rainer, Hautaniemi, Sampsa, Huhtinen, Kaisa
Publicado 2021

The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes

por Jacobs, Jelle, Atkins, Mardelle, Davie, Kristofer, Imrichova, Hana, Romanelli, Lucia, Christiaens, Valerie, Hulselmans, Gert, Potier, Delphine, Wouters, Jasper, Taskiran, Ibrahim Ihsan, Paciello, Giulia, González-Blas, Carmen Bravo, Koldere, Duygu, Aibar, Sara, Halder, Georg, Aerts, Stein
Publicado 2018

Novel and Rare Fusion Transcripts Involving Transcription Factors and Tumor Suppressor Genes in Acute Myeloid Leukemia

por Padella, Antonella, Simonetti, Giorgia, Paciello, Giulia, Giotopoulos, George, Baldazzi, Carmen, Righi, Simona, Ghetti, Martina, Stengel, Anna, Guadagnuolo, Viviana, De Tommaso, Rossella, Papayannidis, Cristina, Robustelli, Valentina, Franchini, Eugenia, Ghelli Luserna di Rorà, Andrea, Ferrari, Anna, Fontana, Maria Chiara, Bruno, Samantha, Ottaviani, Emanuela, Soverini, Simona, Storlazzi, Clelia Tiziana, Haferlach, Claudia, Sabattini, Elena, Testoni, Nicoletta, Iacobucci, Ilaria, Huntly, Brian J. P., Ficarra, Elisa, Martinelli, Giovanni
Publicado 2019