Update notifications for the BioCyc collection of databases

por Paley, Suzanne, Karp, Peter D
Publicado 2017

The MultiOmics Explainer: explaining omics results in the context of a pathway/genome database

por Paley, Suzanne, Karp, Peter D.
Publicado 2019

The BioCyc Metabolic Network Explorer

por Paley, Suzanne, Karp, Peter D.
Publicado 2021

The Pathway Tools cellular overview diagram and Omics Viewer

por Paley, Suzanne M., Karp, Peter D.
Publicado 2006

Regulatory network operations in the Pathway Tools software

por Paley, Suzanne M, Latendresse, Mario, Karp, Peter D
Publicado 2012

Leveraging Curation Among Escherichia coli Pathway/Genome Databases Using Ortholog-Based Annotation Propagation

por Paley, Suzanne, Keseler, Ingrid M., Krummenacker, Markus, Karp, Peter D.
Publicado 2021

Pathway collages: personalized multi-pathway diagrams

por Paley, Suzanne, O’Maille, Paul E., Weaver, Daniel, Karp, Peter D.
Publicado 2016

Pathway Tools Visualization of Organism-Scale Metabolic Networks

por Paley, Suzanne, Billington, Richard, Herson, James, Krummenacker, Markus, Karp, Peter D.
Publicado 2021

Groups: knowledge spreadsheets for symbolic biocomputing

por Travers, Michael, Paley, Suzanne M., Shrager, Jeff, Holland, Timothy A., Karp, Peter D.
Publicado 2013

The Omics Dashboard for interactive exploration of gene-expression data

por Paley, Suzanne, Parker, Karen, Spaulding, Aaron, Tomb, Jean-Francois, O’Maille, Paul, Karp, Peter D.
Publicado 2017

Pathway Tools Management of Pathway/Genome Data for Microbial Communities

por Karp, Peter D., Paley, Suzanne, Krummenacker, Markus, Kothari, Anamika, Wannemuehler, Michael J., Phillips, Gregory J.
Publicado 2022

Beyond the genome (BTG) is a (PGDB) pathway genome database: HumanCyc

por Trupp, Miles, Altman, Tomer, Fulcher, Carol A, Caspi, Ron, Krummenacker, Markus, Paley, Suzanne, Karp, Peter D
Publicado 2010

Computational Metabolomics Operations at BioCyc.org

por Karp, Peter D., Billington, Richard, Holland, Timothy A., Kothari, Anamika, Krummenacker, Markus, Weaver, Daniel, Latendresse, Mario, Paley, Suzanne
Publicado 2015

A Comparison of Microbial Genome Web Portals

por Karp, Peter D., Ivanova, Natalia, Krummenacker, Markus, Kyrpides, Nikos, Latendresse, Mario, Midford, Peter, Ong, Wai Kit, Paley, Suzanne, Seshadri, Rekha
Publicado 2019

EcoCyc: a comprehensive database resource for Escherichia coli

por Keseler, Ingrid M., Collado-Vides, Julio, Gama-Castro, Socorro, Ingraham, John, Paley, Suzanne, Paulsen, Ian T., Peralta-Gil, Martín, Karp, Peter D.
Publicado 2005

The MetaCyc database of metabolic pathways and enzymes - a 2019 update

por Caspi, Ron, Billington, Richard, Keseler, Ingrid M, Kothari, Anamika, Krummenacker, Markus, Midford, Peter E, Ong, Wai Kit, Paley, Suzanne, Subhraveti, Pallavi, Karp, Peter D
Publicado 2020

Erratum for Proctor et al., “Resources To Facilitate Use of the Altered Schaedler Flora (ASF) Mouse Model To Study Microbiome Function”

por Proctor, Alexandra, Parvinroo, Shadi, Richie, Tanner, Jia, Xinglin, Lee, Sonny T. M., Karp, Peter D., Paley, Suzanne, Kostic, Aleksandar D., Pierre, Joseph F., Wannemuehler, Michael J., Phillips, Gregory J.
Publicado 2023

Resources to Facilitate Use of the Altered Schaedler Flora (ASF) Mouse Model to Study Microbiome Function

por Proctor, Alexandra, Parvinroo, Shadi, Richie, Tanner, Jia, Xinglin, Lee, Sonny T. M., Karp, Peter D., Paley, Suzanne, Kostic, Aleksandar D., Pierre, Joseph F., Wannemuehler, Michael J., Phillips, Gregory J.
Publicado 2022

MetaCyc: a multiorganism database of metabolic pathways and enzymes

por Caspi, Ron, Foerster, Hartmut, Fulcher, Carol A., Hopkinson, Rebecca, Ingraham, John, Kaipa, Pallavi, Krummenacker, Markus, Paley, Suzanne, Pick, John, Rhee, Seung Y., Tissier, Christophe, Zhang, Peifen, Karp, Peter D.
Publicado 2006

The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

por Caspi, Ron, Foerster, Hartmut, Fulcher, Carol A., Kaipa, Pallavi, Krummenacker, Markus, Latendresse, Mario, Paley, Suzanne, Rhee, Seung Y., Shearer, Alexander G., Tissier, Christophe, Walk, Thomas C., Zhang, Peifen, Karp, Peter D.
Publicado 2008