Syntheses of 4′-thioribonucleosides and thermodynamic stability and crystal structure of RNA oligomers with incorporated 4′-thiocytosine

por Haeberli, Peter, Berger, Imre, Pallan, Pradeep S., Egli, Martin
Publicado 2005

Backbone-base inclination as a fundamental determinant of nucleic acid self- and cross-pairing

por Pallan, Pradeep S., Lubini, Paolo, Bolli, Martin, Egli, Martin
Publicado 2007

The Enzyme‐Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid

por Jovanovic, Dejana, Tremmel, Peter, Pallan, Pradeep S., Egli, Martin, Richert, Clemens
Publicado 2020

Structure, stability and function of 5-chlorouracil modified A:U and G:U base pairs

por Patra, Amritraj, Harp, Joel, Pallan, Pradeep S., Zhao, Linlin, Abramov, Mikhail, Herdewijn, Piet, Egli, Martin
Publicado 2013

Cryo neutron crystallography demonstrates influence of RNA 2′-OH orientation on conformation, sugar pucker and water structure

por Harp, Joel M, Lybrand, Terry P, Pallan, Pradeep S, Coates, Leighton, Sullivan, Brendan, Egli, Martin
Publicado 2022

The peroxidation-derived DNA adduct, 6-oxo-M(1)dG, is a strong block to replication by human DNA polymerase η

por Richie-Jannetta, Robyn, Pallan, Pradeep, Kingsley, Philip J., Kamdar, Nikhil, Egli, Martin, Marnett, Lawrence J.
Publicado 2023

Unexpected origins of the enhanced pairing affinity of 2′-fluoro-modified RNA

por Pallan, Pradeep S., Greene, Emily M., Jicman, Paul Andrei, Pandey, Rajendra K., Manoharan, Muthiah, Rozners, Eriks, Egli, Martin
Publicado 2011

Altering the Electrostatic Potential in the Major Groove: Thermodynamic and Structural Characterization of 7-Deaza-2′-deoxyadenosine:dT Base Pairing in DNA

por Kowal, Ewa A., Ganguly, Manjori, Pallan, Pradeep S., Marky, Luis A., Gold, Barry, Egli, Martin, Stone, Michael P.
Publicado 2011

Amides are excellent mimics of phosphate internucleoside linkages and are well tolerated in short interfering RNAs

por Mutisya, Daniel, Selvam, Chelliah, Lunstad, Benjamin D., Pallan, Pradeep S., Haas, Amanda, Leake, Devin, Egli, Martin, Rozners, Eriks
Publicado 2014

Recognition of O(6)-benzyl-2′-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction

por Kowal, Ewa A., Lad, Rahul R., Pallan, Pradeep S., Dhummakupt, Elizabeth, Wawrzak, Zdzislaw, Egli, Martin, Sturla, Shana J., Stone, Michael P.
Publicado 2013

Differential Stabilities and Sequence-Dependent Base Pair Opening Dynamics of Watson–Crick Base Pairs with 5-Hydroxymethylcytosine, 5-Formylcytosine, or 5-Carboxylcytosine

por Szulik, Marta W., Pallan, Pradeep S., Nocek, Boguslaw, Voehler, Markus, Banerjee, Surajit, Brooks, Sonja, Joachimiak, Andrzej, Egli, Martin, Eichman, Brandt F., Stone, Michael P.
Publicado 2015

Correction to Differential Stabilities and Sequence-Dependent Base Pair Opening Dynamics of Watson–Crick Base Pairs with 5-Hydroxymethylcytosine, 5-Formylcytosine, or 5-Carboxylcyt...

por Szulik, Marta W., Pallan, Pradeep S., Nocek, Boguslaw, Voehler, Markus, Banerjee, Surajit, Brooks, Sonja, Joachimiak, Andrzej, Egli, Martin, Eichman, Brandt F., Stone, Michael P.
Publicado 2015

Amide linkages mimic phosphates in RNA interactions with proteins and are well tolerated in the guide strand of short interfering RNAs

por Mutisya, Daniel, Hardcastle, Travis, Cheruiyot, Samwel K., Pallan, Pradeep S., Kennedy, Scott D., Egli, Martin, Kelley, Melissa L., Smith, Anja van Brabant, Rozners, Eriks
Publicado 2017

Synthesis, chirality-dependent conformational and biological properties of siRNAs containing 5′-(R)- and 5′-(S)-C-methyl-guanosine

por Mikami, Atsushi, Erande, Namrata, Matsuda, Shigeo, Kel’in, Alexander, Woods, Lauren Blair, Chickering, Tyler, Pallan, Pradeep S, Schlegel, Mark K, Zlatev, Ivan, Egli, Martin, Manoharan, Muthiah
Publicado 2020

Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RIS...

por Li, Feng, Pallan, Pradeep S., Maier, Martin A., Rajeev, Kallanthottathil G., Mathieu, Steven L., Kreutz, Christoph, Fan, Yupeng, Sanghvi, Jayodita, Micura, Ronald, Rozners, Eriks, Manoharan, Muthiah, Egli, Martin
Publicado 2007

Evoking picomolar binding in RNA by a single phosphorodithioate linkage

por Abeydeera, N. Dinuka, Egli, Martin, Cox, Nehemiah, Mercier, Karen, Conde, Jonas Nascimento, Pallan, Pradeep S., Mizurini, Daniella M., Sierant, Malgorzata, Hibti, Fatima-Ezzahra, Hassell, Tom, Wang, Tianzhi, Liu, Feng-Wu, Liu, Hong-Min, Martinez, Carlos, Sood, Anil K., Lybrand, Terry P., Frydman, Chiraz, Monteiro, Robson Q., Gomer, Richard H., Nawrot, Barbara, Yang, Xianbin
Publicado 2016