CellNeighborEX: deciphering neighbor‐dependent gene expression from spatial transcriptomics data

por Kim, Hyobin, Kumar, Amit, Lövkvist, Cecilia, Palma, António M, Martin, Patrick, Kim, Junil, Bhoopathi, Praveen, Trevino, Jose, Fisher, Paul, Madan, Esha, Gogna, Rajan, Won, Kyoung Jae
Publicado 2023

Neighbor-specific gene expression revealed from physically interacting cells during mouse embryonic development

por Kim, Junil, Rothová, Michaela Mrugala, Madan, Esha, Rhee, Siyeon, Weng, Guangzheng, Palma, António M., Liao, Linbu, David, Eyal, Amit, Ido, Hajkarim, Morteza Chalabi, Vudatha, Vignesh, Gutiérrez-García, Andrés, Moreno, Eduardo, Winn, Robert, Trevino, Jose, Fisher, Paul B., Brickman, Joshua M., Gogna, Rajan, Won, Kyoung Jae
Publicado 2023

HIF-transcribed p53 chaperones HIF-1α

por Madan, Esha, Parker, Taylor M, Pelham, Christopher J, Palma, Antonio M, Peixoto, Maria L, Nagane, Masaki, Chandaria, Aliya, Tomás, Ana R, Canas-Marques, Rita, Henriques, Vanessa, Galzerano, Antonio, Cabral-Teixeira, Joaquim, Selvendiran, Karuppaiyah, Kuppusamy, Periannan, Carvalho, Carlos, Beltran, Antonio, Moreno, Eduardo, Pati, Uttam K, Gogna, Rajan
Publicado 2019

Flower lose, a cell fitness marker, predicts COVID‐19 prognosis

por Yekelchyk, Michail, Madan, Esha, Wilhelm, Jochen, Short, Kirsty R, Palma, António M, Liao, Linbu, Camacho, Denise, Nkadori, Everlyne, Winters, Michael T, Rice, Emily S, Rolim, Inês, Cruz‐Duarte, Raquel, Pelham, Christopher J, Nagane, Masaki, Gupta, Kartik, Chaudhary, Sahil, Braun, Thomas, Pillappa, Raghavendra, Parker, Mark S, Menter, Thomas, Matter, Matthias, Haslbauer, Jasmin Dionne, Tolnay, Markus, Galior, Kornelia D, Matkwoskyj, Kristina A, McGregor, Stephanie M, Muller, Laura K, Rakha, Emad A, Lopez‐Beltran, Antonio, Drapkin, Ronny, Ackermann, Maximilian, Fisher, Paul B, Grossman, Steven R, Godwin, Andrew K, Kulasinghe, Arutha, Martinez, Ivan, Marsh, Clay B, Tang, Benjamin, Wicha, Max S, Won, Kyoung Jae, Tzankov, Alexandar, Moreno, Eduardo, Gogna, Rajan
Publicado 2021