Mucosal microbiotas and their role in stem cell transplantation

por Ingham, Anna Cäcilia, Pamp, Sünje Johanna
Publicado 2022

Assessing and removing the effect of unwanted technical variations in microbiome data

por Fachrul, Muhamad, Méric, Guillaume, Inouye, Michael, Pamp, Sünje Johanna, Salim, Agus
Publicado 2022

A Peek into the Plasmidome of Global Sewage

por Kirstahler, Philipp, Teudt, Frederik, Otani, Saria, Aarestrup, Frank M., Pamp, Sünje Johanna
Publicado 2021

Standard Sample Storage Conditions Have an Impact on Inferred Microbiome Composition and Antimicrobial Resistance Patterns

por Poulsen, Casper Sahl, Kaas, Rolf Sommer, Aarestrup, Frank M., Pamp, Sünje Johanna
Publicado 2021

Microbiota long-term dynamics and prediction of acute graft-versus-host disease in pediatric allogeneic stem cell transplantation

por Ingham, Anna Cäcilia, Kielsen, Katrine, Mordhorst, Hanne, Ifversen, Marianne, Aarestrup, Frank M., Müller, Klaus Gottlob, Pamp, Sünje Johanna
Publicado 2021

Draft Genome Sequence of Acinetobacter johnsonii C6, an Environmental Isolate Engaging in Interspecific Metabolic Interactions

por Kaas, Rolf Sommer, Mordhorst, Hanne, Leekitcharoenphon, Pimlapas, Dyring Jensen, Jacob, Haagensen, Janus A. J., Molin, Søren, Pamp, Sünje Johanna
Publicado 2017

Genomics-Based Identification of Microorganisms in Human Ocular Body Fluid

por Kirstahler, Philipp, Bjerrum, Søren Solborg, Friis-Møller, Alice, la Cour, Morten, Aarestrup, Frank M., Westh, Henrik, Pamp, Sünje Johanna
Publicado 2018

ERRATUM TO: Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approac...

por De Cesare, Alessandra, Oliveri, Chiara, Lucchi, Alex, Pasquali, Frederique, Pamp, Sünje Johanna, Mordhorst, Hanne, Wylezich, Claudia, Poulsen, Casper, Manfreda, Gerardo
Publicado 2020

Specific gut microbiome members are associated with distinct immune markers in pediatric allogeneic hematopoietic stem cell transplantation

por Ingham, Anna Cäcilia, Kielsen, Katrine, Cilieborg, Malene Skovsted, Lund, Ole, Holmes, Susan, Aarestrup, Frank M., Müller, Klaus Gottlob, Pamp, Sünje Johanna
Publicado 2019

Addressing Learning Needs on the Use of Metagenomics in Antimicrobial Resistance Surveillance

por Duarte, Ana Sofia Ribeiro, Stärk, Katharina D. C., Munk, Patrick, Leekitcharoenphon, Pimlapas, Bossers, Alex, Luiken, Roosmarijn, Sarrazin, Steven, Lukjancenko, Oksana, Pamp, Sünje Johanna, Bortolaia, Valeria, Nissen, Jakob Nybo, Kirstahler, Philipp, Van Gompel, Liese, Poulsen, Casper Sahl, Kaas, Rolf Sommer, Hellmér, Maria, Hansen, Rasmus Borup, Gomez, Violeta Munoz, Hald, Tine
Publicado 2020

Metagenomics-Based Proficiency Test of Smoked Salmon Spiked with a Mock Community

por Sala, Claudia, Mordhorst, Hanne, Grützke, Josephine, Brinkmann, Annika, Petersen, Thomas N., Poulsen, Casper, Cotter, Paul D., Crispie, Fiona, Ellis, Richard J., Castellani, Gastone, Amid, Clara, Hakhverdyan, Mikhayil, Guyader, Soizick Le, Manfreda, Gerardo, Mossong, Joël, Nitsche, Andreas, Ragimbeau, Catherine, Schaeffer, Julien, Schlundt, Joergen, Tay, Moon Y. F., Aarestrup, Frank M., Hendriksen, Rene S., Pamp, Sünje Johanna, De Cesare, Alessandra
Publicado 2020

Reconstruction of ancient microbial genomes from the human gut

por Wibowo, Marsha C., Yang, Zhen, Borry, Maxime, Hübner, Alexander, Huang, Kun D., Tierney, Braden T., Zimmerman, Samuel, Barajas-Olmos, Francisco, Contreras-Cubas, Cecilia, García-Ortiz, Humberto, Martínez-Hernández, Angélica, Luber, Jacob M., Kirstahler, Philipp, Blohm, Tre, Smiley, Francis E., Arnold, Richard, Ballal, Sonia A., Pamp, Sünje Johanna, Russ, Julia, Maixner, Frank, Rota-Stabelli, Omar, Segata, Nicola, Reinhard, Karl, Orozco, Lorena, Warinner, Christina, Snow, Meradeth, LeBlanc, Steven, Kostic, Aleksandar D.
Publicado 2021