Standards and Ontologies for Functional Genomics: Towards Unified Ontologies for Biology and Biomedicine

por Harris, Midori A., Parkinson, Helen
Publicado 2003

The MGED Ontology: A Framework for Describing Functional Genomics Experiments

por Stoeckert, Christian J., Parkinson, Helen
Publicado 2003

Standards and Ontologies for Functional Genomics 2

por Harris, Midori A., Parkinson, Helen
Publicado 2004

Large scale comparison of global gene expression patterns in human and mouse

por Zheng-Bradley, Xiangqun, Rung, Johan, Parkinson, Helen, Brazma, Alvis
Publicado 2010

Comparison, alignment, and synchronization of cell line information between CLO and EFO

por Ong, Edison, Sarntivijai, Sirarat, Jupp, Simon, Parkinson, Helen, He, Yongqun
Publicado 2017

Features of a FAIR vocabulary

por Xu, Fuqi, Juty, Nick, Goble, Carole, Jupp, Simon, Parkinson, Helen, Courtot, Mélanie
Publicado 2023

MageComet—web application for harmonizing existing large-scale experiment descriptions

por Xue, Vincent, Burdett, Tony, Lukk, Margus, Taylor, Julie, Brazma, Alvis, Parkinson, Helen
Publicado 2012

Ten Simple Rules for Selecting a Bio-ontology

por Malone, James, Stevens, Robert, Jupp, Simon, Hancocks, Tom, Parkinson, Helen, Brooksbank, Cath
Publicado 2016

Webulous and the Webulous Google Add-On - a web service and application for ontology building from templates

por Jupp, Simon, Burdett, Tony, Welter, Danielle, Sarntivijai, Sirarat, Parkinson, Helen, Malone, James
Publicado 2016

Identification of Cancer Related Genes Using a Comprehensive Map of Human Gene Expression

por Torrente, Aurora, Lukk, Margus, Xue, Vincent, Parkinson, Helen, Rung, Johan, Brazma, Alvis
Publicado 2016

Using OWL reasoning to support the generation of novel gene sets for enrichment analysis

por Osumi-Sutherland, David J., Ponta, Enrico, Courtot, Melanie, Parkinson, Helen, Badi, Laura
Publicado 2018

Cancer Informatics in the U.K.: The NCRI Informatics Initiative

por Reddington, Fiona, Wilkinson, J. Max, Clark, Robin, Parkinson, Helen, Kerr, Peter, Begent, Richard
Publicado 2007

The human-induced pluripotent stem cell initiative—data resources for cellular genetics

por Streeter, Ian, Harrison, Peter W., Faulconbridge, Adam, Flicek, Paul, Parkinson, Helen, Clarke, Laura
Publicado 2017

Pleiotropy data resource as a primer for investigating co-morbidities/multi-morbidities and their role in disease

por Muñoz-Fuentes, Violeta, Haselimashhadi, Hamed, Santos, Luis, Westerberg, Henrik, Parkinson, Helen, Mason, Jeremy
Publicado 2021

Importing ArrayExpress datasets into R/Bioconductor

por Kauffmann, Audrey, Rayner, Tim F., Parkinson, Helen, Kapushesky, Misha, Lukk, Margus, Brazma, Alvis, Huber, Wolfgang
Publicado 2009

The BioSample Database (BioSD) at the European Bioinformatics Institute

por Gostev, Mikhail, Faulconbridge, Adam, Brandizi, Marco, Fernandez-Banet, Julio, Sarkans, Ugis, Brazma, Alvis, Parkinson, Helen
Publicado 2012

The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation

por Malone, James, Brown, Andy, Lister, Allyson L, Ison, Jon, Hull, Duncan, Parkinson, Helen, Stevens, Robert
Publicado 2014

Reporting phenotypes in mouse models when considering body size as a potential confounder

por Oellrich, Anika, Meehan, Terrence F., Parkinson, Helen, Sarntivijai, Sirarat, White, Jacqueline K., Karp, Natasha A.
Publicado 2016

OpenStats: A robust and scalable software package for reproducible analysis of high-throughput phenotypic data

por Haselimashhadi, Hamed, Mason, Jeremy C., Mallon, Ann-Marie, Smedley, Damian, Meehan, Terrence F., Parkinson, Helen
Publicado 2020

The cellular microscopy phenotype ontology

por Jupp, Simon, Malone, James, Burdett, Tony, Heriche, Jean-Karim, Williams, Eleanor, Ellenberg, Jan, Parkinson, Helen, Rustici, Gabriella
Publicado 2016