Assessment of protein set coherence using functional annotations

por Chagoyen, Monica, Carazo, Jose M, Pascual-Montano, Alberto
Publicado 2008

Moara: a Java library for extracting and normalizing gene and protein mentions

por Neves, Mariana L, Carazo, José-María, Pascual-Montano, Alberto
Publicado 2010

GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics

por Tabas-Madrid, Daniel, Nogales-Cadenas, Ruben, Pascual-Montano, Alberto
Publicado 2012

Gene signature associated with benign neurofibroma transformation to malignant peripheral nerve sheath tumors

por Martínez, Marta, Sorzano, Carlos O. S., Pascual-Montano, Alberto, Carazo, Jose M.
Publicado 2017

Functional Analysis beyond Enrichment: Non-Redundant Reciprocal Linkage of Genes and Biological Terms

por Fontanillo, Celia, Nogales-Cadenas, Ruben, Pascual-Montano, Alberto, De Las Rivas, Javier
Publicado 2011

Discovering semantic features in the literature: a foundation for building functional associations

por Chagoyen, Monica, Carmona-Saez, Pedro, Shatkay, Hagit, Carazo, Jose M, Pascual-Montano, Alberto
Publicado 2006

A literature-based similarity metric for biological processes

por Chagoyen, Monica, Carmona-Saez, Pedro, Gil, Concha, Carazo, Jose M, Pascual-Montano, Alberto
Publicado 2006

GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists

por Carmona-Saez, Pedro, Chagoyen, Monica, Tirado, Francisco, Carazo, Jose M, Pascual-Montano, Alberto
Publicado 2007

CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster

por Alves-Cruzeiro, Joao Miguel da Conceiçao, Nogales-Cadenas, Rubén, Pascual-Montano, Alberto Domingo
Publicado 2014

CentrosomeDB: a human centrosomal proteins database

por Nogales-Cadenas, Rubén, Abascal, Federico, Díez-Pérez, Javier, Carazo, José María, Pascual-Montano, Alberto
Publicado 2009

Integrated analysis of gene expression by association rules discovery

por Carmona-Saez, Pedro, Chagoyen, Monica, Rodriguez, Andres, Trelles, Oswaldo, Carazo, Jose M, Pascual-Montano, Alberto
Publicado 2006

Biclustering of gene expression data by non-smooth non-negative matrix factorization

por Carmona-Saez, Pedro, Pascual-Marqui, Roberto D, Tirado, F, Carazo, Jose M, Pascual-Montano, Alberto
Publicado 2006

NMF-mGPU: non-negative matrix factorization on multi-GPU systems

por Mejía-Roa, Edgardo, Tabas-Madrid, Daniel, Setoain, Javier, García, Carlos, Tirado, Francisco, Pascual-Montano, Alberto
Publicado 2015

Comparison of molecular dynamics and superfamily spaces of protein domain deformation

por Velázquez-Muriel, Javier A, Rueda, Manuel, Cuesta, Isabel, Pascual-Montano, Alberto, Orozco, Modesto, Carazo, José-María
Publicado 2009

bioNMF: a versatile tool for non-negative matrix factorization in biology

por Pascual-Montano, Alberto, Carmona-Saez, Pedro, Chagoyen, Monica, Tirado, Francisco, Carazo, Jose M, Pascual-Marqui, Roberto D
Publicado 2006

SENT: semantic features in text

por Vazquez, Miguel, Carmona-Saez, Pedro, Nogales-Cadenas, Ruben, Chagoyen, Monica, Tirado, Francisco, Carazo, Jose Maria, Pascual-Montano, Alberto
Publicado 2009

GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information

por Nogales-Cadenas, Ruben, Carmona-Saez, Pedro, Vazquez, Miguel, Vicente, Cesar, Yang, Xiaoyuan, Tirado, Francisco, Carazo, Jose María, Pascual-Montano, Alberto
Publicado 2009

Improving miRNA-mRNA interaction predictions

por Tabas-Madrid, Daniel, Muniategui, Ander, Sánchez-Caballero, Ignacio, Martínez-Herrera, Dannys Jorge, S Sorzano, Carlos Oscar, Rubio, Angel, Pascual-Montano, Alberto
Publicado 2014

Quantification of miRNA-mRNA Interactions

por Muniategui, Ander, Nogales-Cadenas, Rubén, Vázquez, Miguél, L. Aranguren, Xabier, Agirre, Xabier, Luttun, Aernout, Prosper, Felipe, Pascual-Montano, Alberto, Rubio, Angel
Publicado 2012

SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays

por Anton, Miguel A, Gorostiaga, Dorleta, Guruceaga, Elizabeth, Segura, Victor, Carmona-Saez, Pedro, Pascual-Montano, Alberto, Pio, Ruben, Montuenga, Luis M, Rubio, Angel
Publicado 2008