Bioinformatics of Cancer ncRNA in High Throughput Sequencing: Present State and Challenges

por Jorge, Natasha Andressa Nogueira, Ferreira, Carlos Gil, Passetti, Fabio
Publicado 2012

Combined Analysis of SNP Array Data Identifies Novel CNV Candidates and Pathways in Ependymoma and Mesothelioma

por Wajnberg, Gabriel, Carvalho, Benilton S., Ferreira, Carlos G., Passetti, Fabio
Publicado 2015

Using RNA Sequence and Structure for the Prediction of Riboswitch Aptamer: A Comprehensive Review of Available Software and Tools

por Antunes, Deborah, Jorge, Natasha A. N., Caffarena, Ernesto R., Passetti, Fabio
Publicado 2018

Segtor: Rapid Annotation of Genomic Coordinates and Single Nucleotide Variations Using Segment Trees

por Renaud, Gabriel, Neves, Pedro, Folador, Edson Luiz, Ferreira, Carlos Gil, Passetti, Fabio
Publicado 2011

ExVe: The knowledge base of orthologous proteins identified in fungal extracellular vesicles

por Parreira, Vinícius da Silva Coutinho, Santos, Letícia Graziela Costa, Rodrigues, Marcio L., Passetti, Fabio
Publicado 2021

snoRNA and piRNA expression levels modified by tobacco use in women with lung adenocarcinoma

por Nogueira Jorge, Natasha Andressa, Wajnberg, Gabriel, Ferreira, Carlos Gil, de Sa Carvalho, Benilton, Passetti, Fabio
Publicado 2017

Unraveling RNA dynamical behavior of TPP riboswitches: a comparison between Escherichia coli and Arabidopsis thaliana

por Antunes, Deborah, Jorge, Natasha Andressa Nogueira, Garcia de Souza Costa, Mauricio, Passetti, Fabio, Caffarena, Ernesto Raul
Publicado 2019

CD9 predicts ETV6-RUNX1 in childhood B-cell precursor acute lymphoblastic leukemia

por Blunck, Caroline B., Terra-Granado, Eugênia, Noronha, Elda P., Wajnberg, Gabriel, Passetti, Fábio, Pombo-de-Oliveira, Maria S., Emerenciano, Mariana
Publicado 2019

Prevalence of human papillomavirus infection and phylogenetic analysis of HPV-16 E6 variants among infected women from Northern Brazil

por Tamegão-Lopes, Bruna Pedroso, Sousa-Júnior, Edivaldo Costa, Passetti, Fabio, Ferreira, Carlos Gil, de Mello, Wyller Alencar, Duarte Silvestre, Rodrigo Vellasco
Publicado 2014

Selecting Genetic Variants and Interactions Associated with Amyotrophic Lateral Sclerosis: A Group LASSO Approach

por Feronato, Sofia Galvão, Silva, Maria Luiza Matos, Izbicki, Rafael, Farias, Ticiana D. J., Shigunov, Patrícia, Dallagiovanna, Bruno, Passetti, Fabio, dos Santos, Hellen Geremias
Publicado 2022

Identification of Novel Genes and Proteoforms in Angiostrongylus costaricensis through a Proteogenomic Approach

por da Silva, Esdras Matheus Gomes, Rebello, Karina Mastropasqua, Choi, Young-Jun, Gregorio, Vitor, Paschoal, Alexandre Rossi, Mitreva, Makedonka, McKerrow, James H., Neves-Ferreira, Ana Gisele da Costa, Passetti, Fabio
Publicado 2022

Next Generation of Ovarian Cancer Detection Using Aptamers

por Abreu, Rayane da Silva, Antunes, Deborah, Moreira, Aline dos Santos, Passetti, Fabio, Mendonça, Julia Badaró, de Araújo, Natássia Silva, Sassaro, Tayanne Felippe, Alberto, Anael Viana Pinto, Carrossini, Nina, Fernandes, Priscila Valverde, Costa, Mayla Abrahim, Guimarães, Ana Carolina Ramos, Degrave, Wim Maurits Sylvain, Waghabi, Mariana Caldas
Publicado 2023

Dysregulation of Transcription Factor Networks Unveils Different Pathways in Human Papillomavirus 16-Positive Squamous Cell Carcinoma and Adenocarcinoma of the Uterine Cervix

por Bispo, Saloe, Farias, Ticiana D. J., de Araujo-Souza, Patricia Savio, Cintra, Ricardo, dos Santos, Hellen Geremias, Jorge, Natasha Andressa Nogueira, Castro, Mauro Antônio Alves, Wajnberg, Gabriel, Scherer, Nicole de Miranda, Genta, Maria Luiza Nogueira Dias, Carvalho, Jesus Paula, Villa, Luisa Lina, Sichero, Laura, Passetti, Fabio
Publicado 2021

Proteogenomics Reveals Orthologous Alternatively Spliced Proteoforms in the Same Human and Mouse Brain Regions with Differential Abundance in an Alzheimer’s Disease Mouse Model

por da Silva, Esdras Matheus Gomes, Santos, Letícia Graziela Costa, de Oliveira, Flávia Santiago, Freitas, Flávia Cristina de Paula, Parreira, Vinícius da Silva Coutinho, dos Santos, Hellen Geremias, Tavares, Raphael, Carvalho, Paulo Costa, Neves-Ferreira, Ana Gisele da Costa, Haibara, Andrea Siqueira, de Araujo-Souza, Patrícia Savio, Dias, Adriana Abalen Martins, Passetti, Fabio
Publicado 2021

Cell type-specific novel long non-coding RNA and circular RNA in the BLUEPRINT hematopoietic transcriptomes atlas

por Grassi, Luigi, Izuogu, Osagie G., Jorge, Natasha A.N., Seyres, Denis, Bustamante, Mariona, Burden, Frances, Farrow, Samantha, Farahi, Neda, Martin, Fergal J., Frankish, Adam, Mudge, Jonathan M., Kostadima, Myrto, Petersen, Romina, Lambourne, John J., Rowlston, Sophia, Martin-Rendon, Enca, Clarke, Laura, Downes, Kate, Estivill, Xavier, Flicek, Paul, Martens, Joost H.A., Yaspo, Marie-Laure, Stunnenberg, Hendrik G., Ouwehand, Willem H., Passetti, Fabio, Turro, Ernest, Frontini, Mattia
Publicado 2020

Re-emergence of Gamma-like-II and emergence of Gamma-S:E661D SARS-CoV-2 lineages in the south of Brazil after the 2021 outbreak

por Oliveira, Mauro M., Schemberger, Michelle O., Suzukawa, Andreia A., Riediger, Irina N., do Carmo Debur, Maria, Becker, Guilherme, Resende, Paola Cristina, Gräf, Tiago, Balsanelli, Eduardo, de Baura, Valter Antônio, de Souza, Emanuel M., Pedrosa, Fábio O., Alves, Lysangela R., Blanes, Lucas, Nardelli, Sheila Cristina, Aguiar, Alessandra M., Albrecht, Letusa, Zanette, Dalila, Ávila, Andréa R., Morello, Luis Gustavo, Marchini, Fabricio K., dos Santos, Hellen G., Passetti, Fabio, Dallagiovanna, Bruno, Faoro, Helisson
Publicado 2021

Rare genetic variants involved in multisystem inflammatory syndrome in children: a multicenter Brazilian cohort study

por Reis, Bárbara Carvalho Santos Dos, Soares Faccion, Roberta, de Carvalho, Flavia Amendola Anisio, Moore, Daniella Campelo Batalha Cox, Zuma, Maria Celia Chaves, Plaça, Desirée Rodrigues, Salerno Filgueiras, Igor, Leandro Mathias Fonseca, Dennyson, Cabral-Marques, Otavio, Bonomo, Adriana Cesar, Savino, Wilson, Freitas, Flávia Cristina de Paula, Faoro, Helisson, Passetti, Fabio, Robaina, Jaqueline Rodrigues, de Oliveira, Felipe Rezende Caino, Novaes Bellinat, Ana Paula, Zeitel, Raquel de Seixas, Salú, Margarida dos Santos, de Oliveira, Mariana Barros Genuíno, Rodrigues-Santos, Gustavo, Prata-Barbosa, Arnaldo, de Vasconcelos, Zilton Farias Meira
Publicado 2023