Capturing variation in metagenomic assembly graphs with MetaCortex

por Martin, Samuel, Ayling, Martin, Patrono, Livia, Caccamo, Mario, Murcia, Pablo, Leggett, Richard M
Publicado 2023

Phylogenetically distinct equine influenza viruses show different tropism for the swine respiratory tract

por Patrono, Livia V., Bonfante, Francesco, Zanardello, Claudia, Terregino, Calogero, Capua, Ilaria, Murcia, Pablo R.
Publicado 2015

Non‐invasive genomics of respiratory pathogens infecting wild great apes using hybridisation capture

por Patrono, Livia V., Röthemeier, Caroline, Kouadio, Leonce, Couacy‐Hymann, Emmanuel, Wittig, Roman M., Calvignac‐Spencer, Sébastien, Leendertz, Fabian H.
Publicado 2022

Human coronavirus OC43 outbreak in wild chimpanzees, Côte d´Ivoire, 2016

por Patrono, Livia V., Samuni, Liran, Corman, Victor M., Nourifar, Leila, Röthemeier, Caroline, Wittig, Roman M., Drosten, Christian, Calvignac-Spencer, Sébastien, Leendertz, Fabian H.
Publicado 2018

Absence of adaptive evolution is the main barrier against influenza emergence in horses in Asia despite frequent virus interspecies transmission from wild birds

por Zhu, Henan, Damdinjav, Batchuluun, Gonzalez, Gaelle, Patrono, Livia Victoria, Ramirez-Mendoza, Humberto, Amat, Julien A. R., Crispell, Joanna, Parr, Yasmin Amy, Hammond, Toni-ann, Shiilegdamba, Enkhtuvshin, Leung, Y. H. Connie, Peiris, Malik, Marshall, John F., Hughes, Joseph, Gilbert, Martin, Murcia, Pablo R.
Publicado 2019

Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic

por Patrono, Livia V., Vrancken, Bram, Budt, Matthias, Düx, Ariane, Lequime, Sebastian, Boral, Sengül, Gilbert, M. Thomas P., Gogarten, Jan F., Hoffmann, Luisa, Horst, David, Merkel, Kevin, Morens, David, Prepoint, Baptiste, Schlotterbeck, Jasmin, Schuenemann, Verena J., Suchard, Marc A., Taubenberger, Jeffery K., Tenkhoff, Luisa, Urban, Christian, Widulin, Navena, Winter, Eduard, Worobey, Michael, Schnalke, Thomas, Wolff, Thorsten, Lemey, Philippe, Calvignac-Spencer, Sébastien
Publicado 2022

Leprosy in wild chimpanzees

por Hockings, Kimberley J., Mubemba, Benjamin, Avanzi, Charlotte, Pleh, Kamilla, Düx, Ariane, Bersacola, Elena, Bessa, Joana, Ramon, Marina, Metzger, Sonja, Patrono, Livia V., Jaffe, Jenny E., Benjak, Andrej, Bonneaud, Camille, Busso, Philippe, Couacy-Hymann, Emmanuel, Gado, Moussa, Gagneux, Sebastien, Johnson, Roch C., Kodio, Mamoudou, Lynton-Jenkins, Joshua, Morozova, Irina, Mätz-Rensing, Kerstin, Regalla, Aissa, Said, Abílio R., Schuenemann, Verena J., Sow, Samba O., Spencer, John S., Ulrich, Markus, Zoubi, Hyacinthe, Cole, Stewart T., Wittig, Roman M., Calvignac-Spencer, Sebastien, Leendertz, Fabian H.
Publicado 2021

Laboratory Findings, Compassionate Use of Favipiravir, and Outcome in Patients With Ebola Virus Disease, Guinea, 2015—A Retrospective Observational Study

por Kerber, Romy, Lorenz, Eva, Duraffour, Sophie, Sissoko, Daouda, Rudolf, Martin, Jaeger, Anna, Cisse, Sekou Ditinn, Camara, Alseny-Modet, Miranda, Osvaldo, Castro, Carlos M, Akoi Bore, Joseph, Raymond Koundouno, Fara, Repits, Johanna, Afrough, Babak, Becker-Ziaja, Beate, Hinzmann, Julia, Mertens, Marc, Vitoriano, Ines, Hugh Logue, Christopher, Böttcher, Jan-Peter, Pallasch, Elisa, Sachse, Andreas, Bah, Amadou, Cabeza-Cabrerizo, Mar, Nitzsche, Katja, Kuisma, Eeva, Michel, Janine, Holm, Tobias, Zekeng, Elsa Gayle, Cowley, Lauren A, Garcia-Dorival, Isabel, Hetzelt, Nicole, Baum, Jonathan Hans Josef, Portmann, Jasmine, Carter, Lisa, Yenamaberhan, Rahel Lemma, Camino, Alvaro, Enkirch, Theresa, Singethan, Katrin, Meisel, Sarah, Mazzarelli, Antonio, Kosgei, Abigail, Kafetzopoulou, Liana, Rickett, Natasha Y, Patrono, Livia Victoria, Ghebreghiorghis, Luam, Arnold, Ulrike, Colin, Géraldine, Juchet, Sylvain, Marchal, Claire Levy, Kolie, Jacques Seraphin, Beavogui, Abdoul Habib, Wurr, Stephanie, Bockholt, Sabrina, Krumkamp, Ralf, May, Jürgen, Stoecker, Kilian, Fleischmann, Erna, Ippolito, Giuseppe, Carroll, Miles W, Koivogui, Lamine, Magassouba, N’Faly, Keita, Sakoba, Gurry, Céline, Drury, Patrick, Diallo, Boubacar, Formenty, Pierre, Wölfel, Roman, Caro, Antonino Di, Gabriel, Martin, Anglaret, Xavier, Malvy, Denis, Günther, Stephan
Publicado 2019

Real-time, portable genome sequencing for Ebola surveillance

por Quick, Joshua, Loman, Nicholas J., Duraffour, Sophie, Simpson, Jared T., Severi, Ettore, Cowley, Lauren, Bore, Joseph Akoi, Koundouno, Raymond, Dudas, Gytis, Mikhail, Amy, Ouédraogo, Nobila, Afrough, Babak, Bah, Amadou, Baum, Jonathan HJ, Becker-Ziaja, Beate, Boettcher, Jan-Peter, Cabeza-Cabrerizo, Mar, Camino-Sanchez, Alvaro, Carter, Lisa L., Doerrbecker, Juiliane, Enkirch, Theresa, Dorival, Isabel Graciela García, Hetzelt, Nicole, Hinzmann, Julia, Holm, Tobias, Kafetzopoulou, Liana Eleni, Koropogui, Michel, Kosgey, Abigail, Kuisma, Eeva, Logue, Christopher H, Mazzarelli, Antonio, Meisel, Sarah, Mertens, Marc, Michel, Janine, Ngabo, Didier, Nitzsche, Katja, Pallash, Elisa, Patrono, Livia Victoria, Portmann, Jasmine, Repits, Johanna Gabriella, Rickett, Natasha Yasmin, Sachse, Andrea, Singethan, Katrin, Vitoriano, Inês, Yemanaberhan, Rahel L, Zekeng, Elsa G, Trina, Racine, Bello, Alexander, Sall, Amadou Alpha, Faye, Ousmane, Faye, Oumar, Magassouba, N’Faly, Williams, Cecelia V., Amburgey, Victoria, Winona, Linda, Davis, Emily, Gerlach, Jon, Washington, Franck, Monteil, Vanessa, Jourdain, Marine, Bererd, Marion, Camara, Alimou, Somlare, Hermann, Camara, Abdoulaye, Gerard, Marianne, Bado, Guillaume, Baillet, Bernard, Delaune, Déborah, Nebie, Koumpingnin Yacouba, Diarra, Abdoulaye, Savane, Yacouba, Pallawo, Raymond Bernard, Gutierrez, Giovanna Jaramillo, Milhano, Natacha, Roger, Isabelle, Williams, Christopher J, Yattara, Facinet, Lewandowski, Kuiama, Taylor, Jamie, Rachwal, Philip, Turner, Daniel, Pollakis, Georgios, Hiscox, Julian A., Matthews, David A., O’Shea, Matthew K., Johnston, Andrew McD, Wilson, Duncan, Hutley, Emma, Smit, Erasmus, Di Caro, Antonino, Woelfel, Roman, Stoecker, Kilian, Fleischmann, Erna, Gabriel, Martin, Weller, Simon A., Koivogui, Lamine, Diallo, Boubacar, Keita, Sakoba, Rambaut, Andrew, Formenty, Pierre, Gunther, Stephan, Carroll, Miles W.
Publicado 2016